NM_001005242.3(PKP2):c.598G>A (p.Val200Met) AND Cardiovascular phenotype

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Apr 22, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004026549.1

Allele description [Variation Report for NM_001005242.3(PKP2):c.598G>A (p.Val200Met)]

NM_001005242.3(PKP2):c.598G>A (p.Val200Met)

Gene:

PKP2:plakophilin 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

12p11.21

Genomic location:

Preferred name:

NM_001005242.3(PKP2):c.598G>A (p.Val200Met)

Other names:

p.Val200Met

HGVS:

NC_000012.12:g.32878282C>T
NG_009000.1:g.23565G>A
NM_001005242.3:c.598G>AMANE SELECT
NM_004572.4:c.598G>A
NP_001005242.2:p.Val200Met
NP_004563.2:p.Val200Met
NP_004563.2:p.Val200Met
LRG_398t1:c.598G>A
LRG_398:g.23565G>A
LRG_398p1:p.Val200Met
NC_000012.11:g.33031216C>T
NM_004572.3:c.598G>A

Protein change:

V200M

Links:

dbSNP: rs369923216

NCBI 1000 Genomes Browser:

rs369923216

Molecular consequence:

NM_001005242.3:c.598G>A - missense variant - [Sequence Ontology: SO:0001583]
NM_004572.4:c.598G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Name:: Cardiovascular phenotype
Identifiers:: MedGen: CN230736

Recent activity

Clear Turn Off Turn On

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003564912	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Apr 22, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003564912

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Apr 22, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003564912.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The p.V200M variant (also known as c.598G>A), located in coding exon 3 of the PKP2 gene, results from a G to A substitution at nucleotide position 598. The valine at codon 200 is replaced by methionine, an amino acid with highly similar properties. This amino acid position is conserved. In addition, this alteration is predicted to be tolerated by in silico analysis. Since supporting evidence is limited at this time, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Jun 2, 2024

ClinVar

Relating variation to medicine