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NM_020708.5(SLC12A5):c.53-3C>T AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jul 14, 2021
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004029087.1

Allele description [Variation Report for NM_020708.5(SLC12A5):c.53-3C>T]

NM_020708.5(SLC12A5):c.53-3C>T

Gene:
SLC12A5:solute carrier family 12 member 5 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
20q13.12
Genomic location:
Preferred name:
NM_020708.5(SLC12A5):c.53-3C>T
HGVS:
  • NC_000020.11:g.46034945C>T
  • NG_046341.1:g.18256C>T
  • NM_001134771.1:c.122-3C>T
  • NM_001134771.2:c.122-3C>T
  • NM_020708.5:c.53-3C>TMANE SELECT
  • NC_000020.10:g.44663584C>T
  • NM_020708.4:c.53-3C>T
Links:
dbSNP: rs367992610
NCBI 1000 Genomes Browser:
rs367992610
Molecular consequence:
  • NM_001134771.2:c.122-3C>T - intron variant - [Sequence Ontology: SO:0001627]
  • NM_020708.5:c.53-3C>T - intron variant - [Sequence Ontology: SO:0001627]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV003564390Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)
Uncertain significance
(Jul 14, 2021)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV003564390.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

Unlikely to be causative of SLC12A5-related epilepsy (AD) Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Nov 10, 2024