NM_002365.5(MAGEB3):c.777G>C (p.Glu259Asp) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Oct 26, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004082830.1

Allele description [Variation Report for NM_002365.5(MAGEB3):c.777G>C (p.Glu259Asp)]

NM_002365.5(MAGEB3):c.777G>C (p.Glu259Asp)

Gene:

MAGEB3:MAGE family member B3 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

Xp21.2

Genomic location:

Preferred name:

NM_002365.5(MAGEB3):c.777G>C (p.Glu259Asp)

HGVS:

NC_000023.11:g.30236701G>C
NG_015869.1:g.11266G>C
NG_015869.2:g.11046G>C
NM_001386865.1:c.777G>C
NM_002365.5:c.777G>CMANE SELECT
NP_001373794.1:p.Glu259Asp
NP_002356.2:p.Glu259Asp
NC_000023.10:g.30254818G>C
NM_002365.4:c.777G>C

Protein change:

E259D

Molecular consequence:

NM_001386865.1:c.777G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_002365.5:c.777G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

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MULTISPECIES: DUF4295 domain-containing protein [Spirosoma]
MULTISPECIES: DUF4295 domain-containing protein [Spirosoma]
gi|1845052376|ref|WP_171741734.1|

Protein
MULTISPECIES: 30S ribosomal protein S11 [Spirosoma]
MULTISPECIES: 30S ribosomal protein S11 [Spirosoma]
gi|1225831145|ref|WP_093827728.1|

Protein
PREDICTED: Oxyura jamaicensis RAB3A interacting protein (RAB3IP), transcript var...
PREDICTED: Oxyura jamaicensis RAB3A interacting protein (RAB3IP), transcript variant X3, mRNA
gi|1865185886|ref|XM_035336883.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003536385	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Oct 26, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003536385

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Oct 26, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003536385.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.777G>C (p.E259D) alteration is located in exon 5 (coding exon 1) of the MAGEB3 gene. This alteration results from a G to C substitution at nucleotide position 777, causing the glutamic acid (E) at amino acid position 259 to be replaced by an aspartic acid (D). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 3, 2024

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