NM_001294.4(CLPTM1):c.1856G>C (p.Gly619Ala) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jun 22, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004092384.1

Allele description [Variation Report for NM_001294.4(CLPTM1):c.1856G>C (p.Gly619Ala)]

NM_001294.4(CLPTM1):c.1856G>C (p.Gly619Ala)

Gene:

CLPTM1:CLPTM1 regulator of GABA type A receptor forward trafficking [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

19q13.32

Genomic location:

Preferred name:

NM_001294.4(CLPTM1):c.1856G>C (p.Gly619Ala)

HGVS:

NC_000019.10:g.44992743G>C
NM_001282175.2:c.1814G>C
NM_001282176.2:c.1550G>C
NM_001294.4:c.1856G>CMANE SELECT
NP_001269104.1:p.Gly605Ala
NP_001269105.1:p.Gly517Ala
NP_001285.1:p.Gly619Ala
NC_000019.9:g.45496001G>C
NM_001294.2:c.1856G>C
NR_040006.1:n.1877G>C
NR_040007.1:n.1901G>C

Protein change:

G517A

Molecular consequence:

NM_001282175.2:c.1814G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001282176.2:c.1550G>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001294.4:c.1856G>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

Clear Turn Off Turn On

Salmonella enterica str. SA20083039
Salmonella enterica str. SA20083039

biosample
Salmonella enterica str. SA20043041
Salmonella enterica str. SA20043041

biosample
Salmonella enterica str. SA20075157
Salmonella enterica str. SA20075157

biosample
Salmonella enterica str. SA20030575
Salmonella enterica str. SA20030575

biosample
MULTISPECIES: circadian clock protein KaiB [Cyanophyceae]
MULTISPECIES: circadian clock protein KaiB [Cyanophyceae]
gi|1909765275|ref|WP_190646253.1|

Protein

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

Help

Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003557269	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jun 22, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003557269

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jun 22, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003557269.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1856G>C (p.G619A) alteration is located in exon 14 (coding exon 14) of the CLPTM1 gene. This alteration results from a G to C substitution at nucleotide position 1856, causing the glycine (G) at amino acid position 619 to be replaced by an alanine (A). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 10, 2024

ClinVar

Relating variation to medicine