NM_001039503.3(PRSS53):c.1480G>A (p.Gly494Arg) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Aug 13, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004104211.1

Allele description [Variation Report for NM_001039503.3(PRSS53):c.1480G>A (p.Gly494Arg)]

NM_001039503.3(PRSS53):c.1480G>A (p.Gly494Arg)

Gene:

PRSS53:serine protease 53 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

16p11.2

Genomic location:

Preferred name:

NM_001039503.3(PRSS53):c.1480G>A (p.Gly494Arg)

HGVS:

NC_000016.10:g.31084281C>T
NM_001039503.3:c.1480G>AMANE SELECT
NP_001034592.1:p.Gly494Arg
NC_000016.9:g.31095602C>T
NM_001039503.2:c.1480G>A

Protein change:

G494R

Molecular consequence:

NM_001039503.3:c.1480G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

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Actinomycetes 16S ribosomal RNA gene, partial sequence.
Actinomycetes 16S ribosomal RNA gene, partial sequence.
PopSet: 183228339

PopSet
serine protease 53 precursor [Homo sapiens]
serine protease 53 precursor [Homo sapiens]
gi|87196600|ref|NP_001034592.1|

Protein
LOC129663877 [Homo sapiens]
LOC129663877 [Homo sapiens]
Gene ID:129663877

Gene
LOC124907808 [Homo sapiens]
LOC124907808 [Homo sapiens]
Gene ID:124907808

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003567107	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Aug 13, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003567107

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Aug 13, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003567107.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1480G>A (p.G494R) alteration is located in exon 10 (coding exon 10) of the PRSS53 gene. This alteration results from a G to A substitution at nucleotide position 1480, causing the glycine (G) at amino acid position 494 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 10, 2024

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