NM_201624.3(USP33):c.485C>G (p.Thr162Ser) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jul 13, 2021
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004127632.1

Allele description [Variation Report for NM_201624.3(USP33):c.485C>G (p.Thr162Ser)]

NM_201624.3(USP33):c.485C>G (p.Thr162Ser)

Gene:

USP33:ubiquitin specific peptidase 33 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1p31.1

Genomic location:

Preferred name:

NM_201624.3(USP33):c.485C>G (p.Thr162Ser)

HGVS:

NC_000001.11:g.77734386G>C
NM_001377430.1:c.578C>G
NM_001377431.1:c.485C>G
NM_001377432.1:c.578C>G
NM_001377433.1:c.578C>G
NM_001377434.1:c.485C>G
NM_001377435.1:c.485C>G
NM_001377436.1:c.485C>G
NM_001377437.1:c.485C>G
NM_001377438.1:c.-12C>G
NM_001377439.1:c.-12C>G
NM_015017.5:c.578C>G
NM_201624.3:c.485C>GMANE SELECT
NM_201626.3:c.578C>G
NP_001364359.1:p.Thr193Ser
NP_001364360.1:p.Thr162Ser
NP_001364361.1:p.Thr193Ser
NP_001364362.1:p.Thr193Ser
NP_001364363.1:p.Thr162Ser
NP_001364364.1:p.Thr162Ser
NP_001364365.1:p.Thr162Ser
NP_001364366.1:p.Thr162Ser
NP_055832.3:p.Thr193Ser
NP_963918.1:p.Thr162Ser
NP_963920.1:p.Thr193Ser
NC_000001.10:g.78200071G>C
NM_015017.3:c.578C>G

Protein change:

T162S

Molecular consequence:

NM_001377438.1:c.-12C>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001377439.1:c.-12C>G - 5 prime UTR variant - [Sequence Ontology: SO:0001623]
NM_001377430.1:c.578C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377431.1:c.485C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377432.1:c.578C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377433.1:c.578C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377434.1:c.485C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377435.1:c.485C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377436.1:c.485C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_001377437.1:c.485C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_015017.5:c.578C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_201624.3:c.485C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_201626.3:c.578C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

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Nucleotide
S0um-1
S0um-1

biosample

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003598084	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jul 13, 2021)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003598084

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jul 13, 2021)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003598084.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.578C>G (p.T193S) alteration is located in exon 8 (coding exon 7) of the USP33 gene. This alteration results from a C to G substitution at nucleotide position 578, causing the threonine (T) at amino acid position 193 to be replaced by a serine (S). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 26, 2024

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