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NM_001037984.3(SLC38A10):c.1124C>G (p.Ser375Cys) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Dec 27, 2022
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004227009.1

Allele description [Variation Report for NM_001037984.3(SLC38A10):c.1124C>G (p.Ser375Cys)]

NM_001037984.3(SLC38A10):c.1124C>G (p.Ser375Cys)

Gene:
SLC38A10:solute carrier family 38 member 10 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
17q25.3
Genomic location:
Preferred name:
NM_001037984.3(SLC38A10):c.1124C>G (p.Ser375Cys)
HGVS:
  • NC_000017.11:g.81270925G>C
  • NM_001037984.3:c.1124C>GMANE SELECT
  • NM_138570.4:c.1124C>G
  • NP_001033073.1:p.Ser375Cys
  • NP_612637.1:p.Ser375Cys
  • NC_000017.10:g.79244725G>C
  • NM_001037984.1:c.1124C>G
Protein change:
S375C
Molecular consequence:
  • NM_001037984.3:c.1124C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_138570.4:c.1124C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

Recent activity

  • RecName: Full=Dipeptidyl peptidase 1; AltName: Full=Cathepsin C; AltName: Full=C...
    RecName: Full=Dipeptidyl peptidase 1; AltName: Full=Cathepsin C; AltName: Full=Cathepsin J; AltName: Full=Dipeptidyl peptidase I; Short=DPP-I; Short=DPPI; AltName: Full=Dipeptidyl transferase; Contains: RecName: Full=Dipeptidyl peptidase 1 exclusion domain chain; AltName: Full=Dipeptidyl peptidase I exclusion domain chain; Contains: RecName: Full=Dipeptidyl peptidase 1 heavy chain; AltName: Full=Dipeptidyl peptidase I heavy chain; Contains: RecName: Full=Dipeptidyl peptidase 1 light chain; AltName: Full=Dipeptidyl peptidase I light chain; Flags: Precursor
    gi|3023454|sp|P97821.1|CATC_MOUSE
    Protein
  • Zosterops consobrinorum isolate SUL2458 NADH dehydrogenase subunit 3 (ND3) gene,...
    Zosterops consobrinorum isolate SUL2458 NADH dehydrogenase subunit 3 (ND3) gene, complete cds; mitochondrial
    gi|1625642680|gb|MH492895.1|
    Nucleotide

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV003726425Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)
Uncertain significance
(Dec 27, 2022)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV003726425.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The c.1124C>G (p.S375C) alteration is located in exon 10 (coding exon 10) of the SLC38A10 gene. This alteration results from a C to G substitution at nucleotide position 1124, causing the serine (S) at amino acid position 375 to be replaced by a cysteine (C). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Oct 26, 2024