NM_198215.4(FAM13C):c.1057A>C (p.Ser353Arg) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jan 26, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004269685.1

Allele description [Variation Report for NM_198215.4(FAM13C):c.1057A>C (p.Ser353Arg)]

NM_198215.4(FAM13C):c.1057A>C (p.Ser353Arg)

Gene:

FAM13C:family with sequence similarity 13 member C [Gene - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

10q21.1

Genomic location:

Preferred name:

NM_198215.4(FAM13C):c.1057A>C (p.Ser353Arg)

HGVS:

NC_000010.11:g.59262613T>G
NG_053188.1:g.105574A>C
NG_053188.2:g.105568A>C
NM_001001971.3:c.942+5940A>C
NM_001143773.1:c.808A>C
NM_001166698.2:c.808A>C
NM_001347840.2:c.808A>C
NM_001347842.2:c.808A>C
NM_001347843.1:c.666+5940A>C
NM_001347844.1:c.808A>C
NM_001347845.1:c.693+5940A>C
NM_001347846.1:c.808A>C
NM_001347847.1:c.808A>C
NM_001347848.1:c.781A>C
NM_001347849.2:c.1057A>C
NM_001347850.2:c.781A>C
NM_001347851.2:c.808A>C
NM_001347852.2:c.1057A>C
NM_198215.4:c.1057A>CMANE SELECT
NP_001137245.1:p.Ser270Arg
NP_001160170.1:p.Ser270Arg
NP_001334769.1:p.Ser270Arg
NP_001334771.1:p.Ser270Arg
NP_001334773.1:p.Ser270Arg
NP_001334775.1:p.Ser270Arg
NP_001334776.1:p.Ser270Arg
NP_001334777.1:p.Ser261Arg
NP_001334778.1:p.Ser353Arg
NP_001334779.1:p.Ser261Arg
NP_001334780.1:p.Ser270Arg
NP_001334781.1:p.Ser353Arg
NP_937858.2:p.Ser353Arg
NC_000010.10:g.61022373T>G
NM_198215.3:c.1057A>C

Protein change:

S261R

Molecular consequence:

NM_001001971.3:c.942+5940A>C - intron variant - [Sequence Ontology: SO:0001627]
NM_001347843.1:c.666+5940A>C - intron variant - [Sequence Ontology: SO:0001627]
NM_001347845.1:c.693+5940A>C - intron variant - [Sequence Ontology: SO:0001627]
NM_001143773.1:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001166698.2:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347840.2:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347842.2:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347844.1:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347846.1:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347847.1:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347848.1:c.781A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347849.2:c.1057A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347850.2:c.781A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347851.2:c.808A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_001347852.2:c.1057A>C - missense variant - [Sequence Ontology: SO:0001583]
NM_198215.4:c.1057A>C - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

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hMCM2 [Homo sapiens]
hMCM2 [Homo sapiens]
gi|516760|dbj|BAA05839.1|

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV003896254	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jan 26, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV003896254

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jan 26, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV003896254.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1057A>C (p.S353R) alteration is located in exon 10 (coding exon 10) of the FAM13C gene. This alteration results from a A to C substitution at nucleotide position 1057, causing the serine (S) at amino acid position 353 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Nov 10, 2024

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