NM_001128215.1(LIPM):c.1101G>A (p.Met367Ile) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Aug 22, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004365542.1

Allele description [Variation Report for NM_001128215.1(LIPM):c.1101G>A (p.Met367Ile)]

NM_001128215.1(LIPM):c.1101G>A (p.Met367Ile)

Genes:

ANKRD22:ankyrin repeat domain 22 [Gene - HGNC]
LIPM:lipase family member M [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

10q23.31

Genomic location:

Preferred name:

NM_001128215.1(LIPM):c.1101G>A (p.Met367Ile)

HGVS:

NC_000010.11:g.88820330G>A
NM_001128215.1:c.1101G>AMANE SELECT
NM_144590.3:c.*2611C>TMANE SELECT
NP_001121687.1:p.Met367Ile
NC_000010.10:g.90580087G>A

Protein change:

M367I

Molecular consequence:

NM_144590.3:c.*2611C>T - 3 prime UTR variant - [Sequence Ontology: SO:0001624]
NM_001128215.1:c.1101G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

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Vibrio sp.1
Vibrio sp.1

biosample
V. chagasii4
V. chagasii4

biosample
[Histone H3]-lysine-36 demethylase [Saccharomyces cerevisiae S288C]
[Histone H3]-lysine-36 demethylase [Saccharomyces cerevisiae S288C]
gi|6320892|ref|NP_010971.1|

Protein
Homo sapiens vomeronasal 1 receptor 4 (VN1R4), mRNA
Homo sapiens vomeronasal 1 receptor 4 (VN1R4), mRNA
gi|71361646|ref|NM_173857.2|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004094351	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Aug 22, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004094351

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Aug 22, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004094351.2

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.1101G>A (p.M367I) alteration is located in exon 9 (coding exon 9) of the LIPM gene. This alteration results from a G to A substitution at nucleotide position 1101, causing the methionine (M) at amino acid position 367 to be replaced by an isoleucine (I). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: Oct 26, 2024

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