NM_001606.5(ABCA2):c.7240G>A (p.Glu2414Lys) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jan 20, 2023
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004392435.1

Allele description [Variation Report for NM_001606.5(ABCA2):c.7240G>A (p.Glu2414Lys)]

NM_001606.5(ABCA2):c.7240G>A (p.Glu2414Lys)

Gene:

ABCA2:ATP binding cassette subfamily A member 2 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

9q34.3

Genomic location:

Preferred name:

NM_001606.5(ABCA2):c.7240G>A (p.Glu2414Lys)

HGVS:

NC_000009.12:g.137008451C>T
NG_011789.1:g.25472G>A
NM_001411042.1:c.7237G>A
NM_001606.5:c.7240G>AMANE SELECT
NM_212533.3:c.7330G>A
NP_001397971.1:p.Glu2413Lys
NP_001597.2:p.Glu2414Lys
NP_997698.1:p.Glu2444Lys
NC_000009.11:g.139902903C>T
NM_212533.2:c.7330G>A

Protein change:

E2413K

Molecular consequence:

NM_001411042.1:c.7237G>A - missense variant - [Sequence Ontology: SO:0001583]
NM_001606.5:c.7240G>A - missense variant - [Sequence Ontology: SO:0001583]
NM_212533.3:c.7330G>A - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

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Homo sapiens olfactory receptor, family 51, subfamily B, member 4, mRNA (cDNA cl...
Homo sapiens olfactory receptor, family 51, subfamily B, member 4, mRNA (cDNA clone MGC:95369 IMAGE:7216908), complete cds
gi|46575737|gb|BC069094.1|

Nucleotide
PREDICTED: Homo sapiens N-acetylglucosamine-1-phosphate transferase subunits alp...
PREDICTED: Homo sapiens N-acetylglucosamine-1-phosphate transferase subunits alpha and beta (GNPTAB), transcript variant X1, mRNA
gi|2462534337|ref|XM_054373202.1|

Nucleotide

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004875783	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jan 20, 2023)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004875783

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jan 20, 2023)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004875783.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.7330G>A (p.E2444K) alteration is located in exon 48 (coding exon 48) of the ABCA2 gene. This alteration results from a G to A substitution at nucleotide position 7330, causing the glutamic acid (E) at amino acid position 2444 to be replaced by a lysine (K). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 7, 2024

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