NM_004672.5(MAP3K6):c.16C>G (p.Pro6Ala) AND not specified

Germline classification:: Uncertain significance (1 submission)
Last evaluated:: Jan 31, 2024
Review status:: 1 star out of maximum of 4 stars
criteria provided, single submitter

Somatic classification of clinical impact:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Somatic classification of oncogenicity:: None
Review status:: (0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided

Record status:: current
Accession:: RCV004408363.1

Allele description [Variation Report for NM_004672.5(MAP3K6):c.16C>G (p.Pro6Ala)]

NM_004672.5(MAP3K6):c.16C>G (p.Pro6Ala)

Gene:

MAP3K6:mitogen-activated protein kinase kinase kinase 6 [Gene - OMIM - HGNC]

Variant type:

single nucleotide variant

Cytogenetic location:

1p36.11

Genomic location:

Preferred name:

NM_004672.5(MAP3K6):c.16C>G (p.Pro6Ala)

HGVS:

NC_000001.11:g.27366582G>C
NG_051309.1:g.6456C>G
NG_090184.1:g.741G>C
NM_001297609.2:c.16C>G
NM_004672.5:c.16C>GMANE SELECT
NP_001284538.1:p.Pro6Ala
NP_004663.3:p.Pro6Ala
LRG_1086t1:c.16C>G
LRG_1086:g.6456C>G
LRG_1086p1:p.Pro6Ala
NC_000001.10:g.27693073G>C
NM_004672.3:c.16C>G

Protein change:

P6A

Molecular consequence:

NM_001297609.2:c.16C>G - missense variant - [Sequence Ontology: SO:0001583]
NM_004672.5:c.16C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:: AllHighlyPenetrant
Identifiers:: MedGen: CN169374

Recent activity

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lamin isoform E [Homo sapiens]
lamin isoform E [Homo sapiens]
gi|544063464|ref|NP_001269553.1|

Protein
pho-11 Putative acid phosphatase 11 [Caenorhabditis elegans]
pho-11 Putative acid phosphatase 11 [Caenorhabditis elegans]
Gene ID:174547

Gene
dpf-1 Dipeptidyl peptidase family member 1 [Caenorhabditis elegans]
dpf-1 Dipeptidyl peptidase family member 1 [Caenorhabditis elegans]
Gene ID:180042

Gene
ltah-1.1 Aminopeptidase ltah-1.1 [Caenorhabditis elegans]
ltah-1.1 Aminopeptidase ltah-1.1 [Caenorhabditis elegans]
Gene ID:178176

Gene

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Submission Accession	Submitter	Review Status (Assertion method)	Clinical Significance (Last evaluated)	Origin	Method	Citations
SCV004900187	Ambry Genetics	criteria provided, single submitter (Ambry Variant Classification Scheme 2023)	Uncertain significance (Jan 31, 2024)	germline	clinical testing	Citation Link

Submission Accession

Submitter

Review Status
(Assertion method)

Clinical Significance
(Last evaluated)

Origin

Method

Citations

SCV004900187

Ambry Genetics

criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)

Uncertain significance
(Jan 31, 2024)

germline

clinical testing

Citation Link

Help

Summary from all submissions

Ethnicity	Origin	Affected	Individuals	Families	Chromosomes tested	Number Tested	Family history	Method
not provided	germline	unknown	not provided	not provided	not provided	not provided	not provided	clinical testing

Details of each submission

From Ambry Genetics, SCV004900187.1

#	Ethnicity	Individuals	Chromosomes Tested	Family History	Method	Citations
1	not provided	not provided	not provided	not provided	clinical testing	not provided

Description

The c.16C>G (p.P6A) alteration is located in exon 1 (coding exon 1) of the MAP3K6 gene. This alteration results from a C to G substitution at nucleotide position 16, causing the proline (P) at amino acid position 6 to be replaced by an alanine (A). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#	Sample				Method		Observation
#	Origin	Affected	Number tested	Tissue	Purpose	Method	Individuals	Allele frequency	Families	Co-occurrences
1	germline	unknown	not provided	not provided	not provided		not provided	not provided	not provided	not provided

Last Updated: May 7, 2024

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