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NM_182943.3(PLOD2):c.1942C>T (p.Arg648Trp) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Mar 21, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004526807.2

Allele description [Variation Report for NM_182943.3(PLOD2):c.1942C>T (p.Arg648Trp)]

NM_182943.3(PLOD2):c.1942C>T (p.Arg648Trp)

Gene:
PLOD2:procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 [Gene - OMIM - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
3q24
Genomic location:
Preferred name:
NM_182943.3(PLOD2):c.1942C>T (p.Arg648Trp)
HGVS:
  • NC_000003.12:g.146071330G>A
  • NG_009251.1:g.95166C>T
  • NM_000935.3:c.1879C>T
  • NM_182943.2:c.1942C>T
  • NM_182943.3:c.1942C>TMANE SELECT
  • NP_000926.2:p.Arg627Trp
  • NP_000926.2:p.Arg627Trp
  • NP_891988.1:p.Arg648Trp
  • NC_000003.11:g.145789117G>A
  • NM_000935.2:c.1879C>T
  • NM_182943.3:c.1942C>T
Protein change:
R627W
Links:
dbSNP: rs368177696
NCBI 1000 Genomes Browser:
rs368177696
Molecular consequence:
  • NM_000935.3:c.1879C>T - missense variant - [Sequence Ontology: SO:0001583]
  • NM_182943.3:c.1942C>T - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Submission AccessionSubmitterReview Status
(Assertion method)
Clinical Significance
(Last evaluated)
OriginMethodCitations
SCV005039265Women's Health and Genetics/Laboratory Corporation of America, LabCorp
criteria provided, single submitter

(LabCorp Variant Classification Summary - May 2015)
Uncertain significance
(Mar 21, 2024)
germlineclinical testing

Citation Link

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Women's Health and Genetics/Laboratory Corporation of America, LabCorp, SCV005039265.2

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided
#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Jul 7, 2024