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NM_001162529.3(FAM135A):c.1169C>G (p.Pro390Arg) AND not specified

Germline classification:
Uncertain significance (1 submission)
Last evaluated:
Jun 16, 2024
Review status:
1 star out of maximum of 4 stars
criteria provided, single submitter
Somatic classification
of clinical impact:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Somatic classification
of oncogenicity:
None
Review status:
(0/4) 0 stars out of maximum of 4 stars
no assertion criteria provided
Record status:
current
Accession:
RCV004625272.1

Allele description [Variation Report for NM_001162529.3(FAM135A):c.1169C>G (p.Pro390Arg)]

NM_001162529.3(FAM135A):c.1169C>G (p.Pro390Arg)

Gene:
FAM135A:family with sequence similarity 135 member A [Gene - HGNC]
Variant type:
single nucleotide variant
Cytogenetic location:
6q13
Genomic location:
Preferred name:
NM_001162529.3(FAM135A):c.1169C>G (p.Pro390Arg)
HGVS:
  • NC_000006.12:g.70524032C>G
  • NG_054903.1:g.115629C>G
  • NM_001105531.3:c.1169C>G
  • NM_001162529.3:c.1169C>GMANE SELECT
  • NM_001330995.3:c.1169C>G
  • NM_001330996.3:c.1247C>G
  • NM_001330997.3:c.1169C>G
  • NM_001330998.3:c.1247C>G
  • NM_001330999.3:c.1247C>G
  • NM_001331000.3:c.1070C>G
  • NM_001331001.3:c.1169C>G
  • NM_001331002.3:c.1169C>G
  • NM_001331003.3:c.1247C>G
  • NM_001331004.3:c.-17-311C>G
  • NM_001331005.3:c.1070C>G
  • NM_001331006.3:c.1247C>G
  • NM_001351599.2:c.1247C>G
  • NM_001351600.2:c.1169C>G
  • NM_001351602.2:c.1169C>G
  • NM_001351607.2:c.1169C>G
  • NM_001351608.2:c.911C>G
  • NM_001351609.2:c.989C>G
  • NM_020819.5:c.1118C>G
  • NP_001099001.1:p.Pro390Arg
  • NP_001156001.1:p.Pro390Arg
  • NP_001317924.1:p.Pro390Arg
  • NP_001317925.1:p.Pro416Arg
  • NP_001317926.1:p.Pro390Arg
  • NP_001317927.1:p.Pro416Arg
  • NP_001317928.1:p.Pro416Arg
  • NP_001317929.1:p.Pro357Arg
  • NP_001317930.1:p.Pro390Arg
  • NP_001317931.1:p.Pro390Arg
  • NP_001317932.1:p.Pro416Arg
  • NP_001317934.1:p.Pro357Arg
  • NP_001317935.1:p.Pro416Arg
  • NP_001338528.1:p.Pro416Arg
  • NP_001338529.1:p.Pro390Arg
  • NP_001338531.1:p.Pro390Arg
  • NP_001338536.1:p.Pro390Arg
  • NP_001338537.1:p.Pro304Arg
  • NP_001338538.1:p.Pro330Arg
  • NP_065870.3:p.Pro373Arg
  • NC_000006.11:g.71233735C>G
  • NM_001162529.1:c.1169C>G
Protein change:
P304R
Molecular consequence:
  • NM_001331004.3:c.-17-311C>G - intron variant - [Sequence Ontology: SO:0001627]
  • NM_001105531.3:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001162529.3:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330995.3:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330996.3:c.1247C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330997.3:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330998.3:c.1247C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001330999.3:c.1247C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001331000.3:c.1070C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001331001.3:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001331002.3:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001331003.3:c.1247C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001331005.3:c.1070C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001331006.3:c.1247C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351599.2:c.1247C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351600.2:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351602.2:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351607.2:c.1169C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351608.2:c.911C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_001351609.2:c.989C>G - missense variant - [Sequence Ontology: SO:0001583]
  • NM_020819.5:c.1118C>G - missense variant - [Sequence Ontology: SO:0001583]

Condition(s)

Synonyms:
AllHighlyPenetrant
Identifiers:
MedGen: CN169374

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Assertion and evidence details

Help
Submission AccessionSubmitterReview Status
(Assertion method)		Clinical Significance
(Last evaluated)		OriginMethodCitations
SCV005112650Ambry Genetics
criteria provided, single submitter

(Ambry Variant Classification Scheme 2023)		Uncertain significance
(Jun 16, 2024) 		germlineclinical testing

Citation Link

Help

Summary from all submissions

EthnicityOriginAffectedIndividualsFamiliesChromosomes testedNumber TestedFamily historyMethod
not providedgermlineunknownnot providednot providednot providednot providednot providedclinical testing

Details of each submission

From Ambry Genetics, SCV005112650.1

#EthnicityIndividualsChromosomes TestedFamily HistoryMethodCitations
1not providednot providednot providednot providedclinical testingnot provided

Description

The c.1169C>G (p.P390R) alteration is located in exon 12 (coding exon 11) of the FAM135A gene. This alteration results from a C to G substitution at nucleotide position 1169, causing the proline (P) at amino acid position 390 to be replaced by an arginine (R). Based on insufficient or conflicting evidence, the clinical significance of this alteration remains unclear.

#SampleMethodObservation
OriginAffectedNumber testedTissuePurposeMethodIndividualsAllele frequencyFamiliesCo-occurrences
1germlineunknownnot providednot providednot providednot providednot providednot providednot provided

Last Updated: Aug 11, 2024