| | | Single nucleotide variant (missense variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Copy number loss | not provided | |
| | ARRDC1, ARRDC1-AS1 +36 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +42 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +37 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +49 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +40 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +52 more | Copy number loss | Kleefstra syndrome 1 | |
| | LOC130003071, LOC130003072 +154 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +24 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +33 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +43 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +44 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +67 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | LOC130003123, LOC130003124 +345 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +24 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | LOC130003044, LOC130003045 +309 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +48 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +46 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +27 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +32 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +14 more | Copy number loss | Kleefstra syndrome 1 | |
| | LOC130003043, LOC130003044 +199 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +18 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +71 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +24 more | Copy number loss | Kleefstra syndrome 1 | |
| | LOC124375238, LOC124375239 +569 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | LOC130003073, LOC130003074 +310 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | LOC130002921, LOC130002922 +572 more | Copy number loss | Kleefstra syndrome 1 | |
| | LOC121366034, LOC121366035 +572 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +46 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +27 more | Copy number loss | Kleefstra syndrome 1 | |
| | ARRDC1, ARRDC1-AS1 +40 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Copy number loss | Kleefstra syndrome 1 | |
| | LOC126860801, LOC129390118 +309 more | Copy number loss | Kleefstra syndrome 1 | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Copy number gain | not specified | |
| | | Copy number gain | not provided | |
| | | Deletion | not provided | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Copy number gain | 9q34.3 microduplication-related neurodevelopmental disorder | |
| | | Duplication | Kleefstra syndrome 1 | |
| | | Deletion | Adams-Oliver syndrome 5 +3 more | GConflicting classifications of pathogenicity |
| | | Duplication | Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndrome | |
| | | Deletion | Intellectual disability, autosomal dominant 8 +1 more | GConflicting classifications of pathogenicity |
| | | Deletion | Rafiq syndrome | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Single nucleotide variant (missense variant) | not specified | |
| | | Copy number gain | not specified | |
| | | Copy number loss | not specified | |
| | ANKRD18A, ANKRD18B +768 more | Copy number gain | not specified | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | Coarctation of aorta +1 more | |
| | | Deletion | Epilepsy +1 more | |
| | LINC02908, LOC651337 +73 more | Deletion | Kleefstra syndrome 1 | |
| | | Copy number loss | not provided | |
| | | Deletion | Autosomal dominant nocturnal frontal lobe epilepsy 5 +2 more | GConflicting classifications of pathogenicity |
| | | Deletion | Kleefstra syndrome 1 | |
| | | Copy number loss | not provided | |
| | | Copy number loss | Microcephaly | |
| | | Copy number gain | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Single nucleotide variant (synonymous variant) | not provided | |
| | | Single nucleotide variant (intron variant) | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |