| | ANKRD54, BAIAP2L2 +50 more | Deletion | Infantile neuroaxonal dystrophy +2 more | GConflicting classifications of pathogenicity |
| | ANKRD54, BAIAP2L2 +29 more | Deletion | not provided | |
| | | Duplication | Adenylosuccinate lyase deficiency | |
| | | Copy number loss | not specified | |
| | ANKRD54, C22orf23 +13 more | Copy number loss | Waardenburg syndrome type 2E | |
| | | Copy number gain | See cases | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | ANKRD54, C22orf23 +17 more | Copy number loss | Waardenburg syndrome type 4C | |
| | ANKRD54, APOBEC3A +76 more | Copy number gain | See cases | |
| | ANKRD54, BAIAP2L2 +31 more | Copy number loss | See cases | |
| | ANKRD54, BAIAP2L2 +41 more | Copy number loss | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | ZNF280A, ZNF280B +438 more | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | ANKRD54, APOBEC3A +177 more | Copy number loss | See cases | |
| | LOC130067403, LOC130067404 +2088 more | Copy number gain | See cases | |
| | IL17RA, LINC01640 +2088 more | Copy number gain | See cases | |
| | LOC130067459, LOC130067460 +273 more | Copy number gain | See cases | |
| | LOC130067651, LOC130067652 +1004 more | Copy number gain | See cases | |
| | ANKRD54, BAIAP2L2 +122 more | Copy number loss | See cases | |
| | | Copy number loss | See cases | |