| | ATXN3L, GS1-600G8.3 (E96K +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (A153V) | Single nucleotide variant (non-coding transcript variant +2 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (L169P +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (G73C) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (F121L) | Single nucleotide variant (missense variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (E26K) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (E50G) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (H223Q +1 more) | Single nucleotide variant (missense variant) | not specified | |
| | | Duplication | not provided | |
| | | Duplication | not provided | |
| | LOC130068417, LOC130068418 +2599 more | Copy number gain | Klinefelter syndrome | |
| | ATXN3L, GS1-600G8.3 (P101S +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (S135F) | Single nucleotide variant (missense variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (T122A) | Single nucleotide variant (missense variant +1 more) | not specified | |
| | | Copy number loss | not specified | |
| | | Copy number loss | not specified | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | ATXN3L, GS1-600G8.3 (M167V +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not provided +1 more | GConflicting classifications of pathogenicity |
| | ATXN3L, GS1-600G8.3 (T228I +1 more) | Single nucleotide variant (missense variant) | not provided +1 more | GConflicting classifications of pathogenicity |
| | ATXN3L, GS1-600G8.3 (T228del +1 more) | Microsatellite (inframe_deletion) | not provided | |
| | | Copy number gain | Klinefelter syndrome | |
| | ATXN3L, GS1-600G8.3 (P65H) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (G103S) | Single nucleotide variant (non-coding transcript variant +2 more) | not specified | |
| | | Deletion | Familial aplasia of the vermis +1 more | |
| | ATXN3L, GS1-600G8.3 (Q176H +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (P191S +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (G172R +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (E67G) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (Q16R) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (A232V +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (Q100E) | Single nucleotide variant (non-coding transcript variant +2 more) | not specified | |
| | ATXN3L, GS1-600G8.3 (H38P) | Single nucleotide variant (non-coding transcript variant +1 more) | not specified | |
| | | Copy number gain | not provided | |
| | | Copy number loss | See cases | |
| | | Copy number gain | Klinefelter syndrome | |
| | | Copy number loss | Turner syndrome | |
| | | Complex | Turner syndrome | |
| | | Copy number loss | Turner syndrome | |
| | | Copy number loss | Turner syndrome | |
| | | Copy number gain | Hypotonia +2 more | |
| | | Copy number gain | not specified | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | See cases | |
| | | Copy number gain | not provided | |
| | ATXN3L, GS1-600G8.3 (K289* +1 more) | Single nucleotide variant (non-coding transcript variant +1 more) | Intellectual disability | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | ARHGAP36, ARHGAP4 +818 more | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | See cases | |
| | SUPT20HL2, SYAP1 +177 more | Deletion | Neurodevelopmental disorder | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number gain | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number loss | not provided | |
| | | Copy number gain | See cases | |
| | | Duplication | Autism | |
| | | Duplication | Autism +1 more | |
| | | Copy number gain | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number gain | not provided | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number loss | See cases | |
| | | Copy number gain | See cases | |
| | | Copy number gain | See cases | |
| | TMEM255A, TMEM31 +819 more | Copy number gain | See cases | |