| | | Single nucleotide variant (splice donor variant) | Enlarged kidney +2 more | |
| | | Indel (frameshift variant +1 more) | Enlarged kidney +2 more | |
| | | Single nucleotide variant (splice acceptor variant) | Enlarged kidney +2 more | |
| | | Single nucleotide variant (non-coding transcript variant +1 more) | Enlarged kidney +3 more | |
| | | Deletion (splice acceptor variant) | Enlarged kidney +3 more | |
| | | Duplication (frameshift variant) | Enlarged kidney +3 more | |
| | | Deletion (splice acceptor variant +1 more) | Anhydramnios +3 more | |
| | | Deletion (frameshift variant) | Enlarged kidney +3 more | |
| | NPHP3, NPHP3-ACAD11 (L1138fs) | Deletion (non-coding transcript variant +1 more) | Enlarged kidney +2 more | |
| | NPHP3, NPHP3-ACAD11 (N761fs) | Insertion (non-coding transcript variant +1 more) | Enlarged kidney +2 more | |
| | | Single nucleotide variant (missense variant) | Multiple renal cysts +1 more | |
| | | Single nucleotide variant (missense variant +1 more) | Multiple renal cysts +2 more | |
| | | Deletion (inframe_indel) | Multiple renal cysts +1 more | |
| | | Single nucleotide variant (missense variant) | Multiple renal cysts +1 more | |
| | | Single nucleotide variant (missense variant) | DDX54-related condition | |
| | | Single nucleotide variant (missense variant) | Neuromuscular disease and ocular or auditory anomalies with or without seizures +4 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (missense variant) | Multiple renal cysts +2 more | |
| | | Single nucleotide variant (intron variant) | Autosomal dominant polycystic kidney disease +2 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (missense variant) | Polycystic kidney disease, adult type +4 more | GPathogenic/Likely pathogenic |
| | | Deletion (frameshift variant) | Lymphangiomyomatosis +5 more | |