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Links from MedGen

Items: 86

VariationLocationGene(s)Protein changeCondition(s)Clinical significance
(Last reviewed)
Review status
1.
GRCh38:
ChrX:41333187-42099271
CASK, DDX3X, GPR34, GPR82, LOC113875025, LOC126863241, NYXSyndromic X-linked intellectual disability Najm type, Intellectual disability, X-linked 102Pathogenic
(Aug 24, 2023)
criteria provided, single submitter
2.
GRCh38:
ChrX:41786713-41853325
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Aug 24, 2023)
criteria provided, single submitter
3.
GRCh37:
ChrX:41413070
GRCh38:
ChrX:41553817
CASKQ618H, Q624H, Q641H, Q647HSyndromic X-linked intellectual disability Najm typeUncertain significance
(Aug 24, 2023)
criteria provided, single submitter
4.
GRCh37:
ChrX:41414884
GRCh38:
ChrX:41555631
CASKL575fs, L581fs, L598fs, L604fsSyndromic X-linked intellectual disability Najm typePathogeniccriteria provided, single submitter
5.
GRCh37:
ChrX:41646428-41646429
GRCh38:
ChrX:41787175-41787176
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Jun 17, 2023)
criteria provided, single submitter
6.
GRCh37:
ChrX:41379775-41379776
GRCh38:
ChrX:41520522-41520523
CASKT864fs, T865fs, T887fs, T888fs, T893fsSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Apr 12, 2023)
criteria provided, single submitter
7.
GRCh37:
ChrX:41420898
GRCh38:
ChrX:41561645
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Feb 23, 2023)
criteria provided, single submitter
8.
GRCh37:
ChrX:41394213
GRCh38:
ChrX:41534960
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Feb 23, 2023)
criteria provided, single submitter
9.
GRCh37:
ChrX:41524649
GRCh38:
ChrX:41665396
CASKG197*Syndromic X-linked intellectual disability Najm typePathogenic
(May 31, 2022)
criteria provided, single submitter
10.
GRCh37:
ChrX:41524673
GRCh38:
ChrX:41665420
CASKE189QSyndromic X-linked intellectual disability Najm typeUncertain significance
(Oct 1, 2021)
criteria provided, single submitter
11.
GRCh37:
ChrX:41428993
GRCh38:
ChrX:41569740
CASKT498fs, T504fsSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Sep 1, 2022)
criteria provided, single submitter
12.
GRCh37:
ChrX:41420815
GRCh38:
ChrX:41561562
CASKM549I, M555ISyndromic X-linked intellectual disability Najm typeUncertain significance
(Oct 15, 2020)
criteria provided, single submitter
13.
GRCh37:
ChrX:41519698
GRCh38:
ChrX:41660445
CASKW275*Syndromic X-linked intellectual disability Najm typePathogenic
(Jun 27, 2022)
criteria provided, single submitter
14.
GRCh37:
ChrX:41530707
GRCh38:
ChrX:41671454
CASKL169*Syndromic X-linked intellectual disability Najm typeLikely pathogenic
(May 22, 2022)
criteria provided, single submitter
15.
GRCh37:
ChrX:41390356
GRCh38:
ChrX:41531103
CASKSyndromic X-linked intellectual disability Najm type, FG syndrome 4, Anemia, nonspherocytic hemolytic, due to G6PD deficiency,
Intellectual disability, CASK-related, X-linked
Likely benign
(Jun 8, 2022)
criteria provided, multiple submitters, no conflicts
16.
GRCh37:
ChrX:41604776
GRCh38:
ChrX:41745523
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Jun 10, 2021)
criteria provided, single submitter
17.
GRCh37:
ChrX:41495830
GRCh38:
ChrX:41636577
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Oct 22, 2020)
criteria provided, single submitter
18.
GRCh37:
ChrX:41524710
GRCh38:
ChrX:41665457
CASKSyndromic X-linked intellectual disability Najm typeUncertain significance
(Oct 5, 2017)
criteria provided, single submitter
19.
GRCh37:
ChrX:41428920
GRCh38:
ChrX:41569667
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Jan 3, 2022)
criteria provided, single submitter
20.
GRCh37:
ChrX:41383278
GRCh38:
ChrX:41524025
CASKV815F, V816F, V839F, V844F, V838FSyndromic X-linked intellectual disability Najm typeUncertain significance
(Jan 3, 2022)
criteria provided, single submitter
21.
GRCh37:
ChrX:41401944
GRCh38:
ChrX:41542691
CASKD696N, D719N, V690M, V719M, V713MSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Dec 2, 2021)
criteria provided, single submitter
22.
GRCh37:
ChrX:41782186
GRCh38:
ChrX:41922933
CASKG19ESyndromic X-linked intellectual disability Najm typeUncertain significance
(Dec 13, 2019)
criteria provided, single submitter
23.
GRCh37:
ChrX:41379846
GRCh38:
ChrX:41520593
CASKE841fs, E842fs, E865fs, E870fsSyndromic X-linked intellectual disability Najm typeLikely pathogenicno assertion criteria provided
24.
GRCh37:
ChrX:41446218
GRCh38:
ChrX:41586965
CASKY413fs, Y419fsSyndromic X-linked intellectual disability Najm typeLikely pathogenicno assertion criteria provided
25.
GRCh37:
ChrX:41412971
GRCh38:
ChrX:41553718
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenicno assertion criteria provided
26.
GRCh37:
ChrX:41524622
GRCh38:
ChrX:41665369
CASKG206Snot provided, Syndromic X-linked intellectual disability Najm type, FG syndrome 4,
Intellectual disability
Conflicting interpretations of pathogenicity
(May 3, 2023)
criteria provided, conflicting interpretations
27.
GRCh37:
ChrX:41519798
GRCh38:
ChrX:41660545
CASKW242*Syndromic X-linked intellectual disability Najm typeLikely pathogenic
(Dec 4, 2019)
criteria provided, single submitter
28.
GRCh37:
ChrX:41519817
GRCh38:
ChrX:41660564
CASKIntellectual disability, CASK-related, X-linked, Syndromic X-linked intellectual disability Najm typeConflicting interpretations of pathogenicity
(Aug 22, 2022)
criteria provided, conflicting interpretations
29.
GRCh37:
ChrX:41413013-41413014
GRCh38:
ChrX:41553760-41553761
CASKN643fs, N637fs, N666fsSyndromic X-linked intellectual disability Najm typePathogenic
(Aug 6, 2019)
criteria provided, single submitter
30.
GRCh37:
ChrX:41413041
GRCh38:
ChrX:41553788
CASKW628*, W634*, W657*, W651*Syndromic X-linked intellectual disability Najm typePathogenic
(Dec 3, 2018)
criteria provided, single submitter
31.
GRCh37:
ChrX:41598707
GRCh38:
ChrX:41739454
CASKH120RSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Jan 4, 2018)
criteria provided, single submitter
32.
GRCh37:
ChrX:41519743-41519749
GRCh38:
ChrX:41660490-41660496
CASKM258fsSyndromic X-linked intellectual disability Najm typePathogenic
(May 28, 2019)
criteria provided, single submitter
33.
GRCh37:
ChrX:41519736
GRCh38:
ChrX:41660483
CASKE263KSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(May 28, 2019)
criteria provided, single submitter
34.
GRCh37:
ChrX:41437702-41437711
GRCh38:
ChrX:41578449-41578458
CASKP462fs, P456fsSyndromic X-linked intellectual disability Najm typePathogenic
(May 28, 2019)
criteria provided, single submitter
35.
GRCh37:
ChrX:41390351
GRCh38:
ChrX:41531098
CASKS781N, S782N, S805N, S810N, S804NSyndromic X-linked intellectual disability Najm typePathogenic
(Apr 11, 2023)
criteria provided, single submitter
36.
GRCh37:
ChrX:41495831-41495832
GRCh38:
ChrX:41636578-41636579
CASKG306fsFG syndrome 4, Syndromic X-linked intellectual disability Najm typePathogenic
(Dec 31, 2017)
criteria provided, single submitter
37.
GRCh37:
ChrX:41519699
GRCh38:
ChrX:41660446
CASKW275*Syndromic X-linked intellectual disability Najm typePathogenic
(Apr 27, 2019)
criteria provided, single submitter
38.
GRCh37:
ChrX:41401978-41401979
GRCh38:
ChrX:41542725-41542726
CASKY708fs, Y679fs, Y685fsCongenital cerebellar hypoplasia, Syndromic X-linked intellectual disability Najm typePathogenic/Likely pathogenic
(Feb 18, 2019)
no assertion criteria provided
39.
GRCh37:
ChrX:41524707
GRCh38:
ChrX:41665454
CASKCongenital cerebellar hypoplasia, Syndromic X-linked intellectual disability Najm typePathogenic/Likely pathogenic
(Feb 18, 2019)
no assertion criteria provided
40.
GRCh37:
ChrX:41394227
GRCh38:
ChrX:41534974
CASKCongenital cerebellar hypoplasia, Syndromic X-linked intellectual disability Najm typeLikely pathogenic
(Feb 18, 2019)
no assertion criteria provided
41.
GRCh37:
ChrX:41383247
GRCh38:
ChrX:41523994
CASKV849A, V825A, V854A, V826A, V848AFG syndrome 4, Syndromic X-linked intellectual disability Najm typeLikely pathogeniccriteria provided, single submitter
42.
GRCh37:
ChrX:41390437-41390438
GRCh38:
ChrX:41531184-41531185
CASKD752fs, D781fs, D753fs, D776fsSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Jun 4, 2018)
no assertion criteria provided
43.
GRCh37:
ChrX:41413101
GRCh38:
ChrX:41553848
CASKG637D, G614D, G608D, G631DSyndromic X-linked intellectual disability Najm type, Intellectual disability, CASK-related, X-linkedConflicting interpretations of pathogenicity
(Aug 13, 2021)
criteria provided, conflicting interpretations
44.
GRCh37:
ChrX:41420836-41420839
GRCh38:
ChrX:41561583-41561586
CASKT542fs, T548fsnot provided, Syndromic X-linked intellectual disability Najm type, Intellectual disability, CASK-related, X-linked
Pathogenic
(May 22, 2022)
criteria provided, multiple submitters, no conflicts
45.
GRCh37:
ChrX:41401943
GRCh38:
ChrX:41542690
CASKSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(May 15, 2018)
criteria provided, single submitter
46.
GRCh37:
ChrX:41420871
GRCh38:
ChrX:41561618
CASKR537*, R531*not provided, Syndromic X-linked intellectual disability Najm typePathogenic/Likely pathogenic
(Jun 27, 2022)
criteria provided, multiple submitters, no conflicts
47.
GRCh37:
ChrX:41495900
GRCh38:
ChrX:41636647
CASKY282*not provided, Syndromic X-linked intellectual disability Najm typePathogenic
(Jan 3, 2022)
criteria provided, multiple submitters, no conflicts
48.
GRCh37:
ChrX:41393958
GRCh38:
ChrX:41534705
CASKIntellectual disability, CASK-related, X-linked, not provided, Syndromic X-linked intellectual disability Najm type
Pathogenic
(Jan 24, 2023)
criteria provided, multiple submitters, no conflicts
49.
GRCh37:
ChrX:41712431
GRCh38:
ChrX:41853178
CASKQ37*Syndromic X-linked intellectual disability Najm typePathogenic
(Nov 1, 2017)
criteria provided, single submitter
50.
GRCh37:
ChrX:41437788
GRCh38:
ChrX:41578535
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Nov 1, 2017)
criteria provided, single submitter
51.
GRCh37:
ChrX:41495900
GRCh38:
ChrX:41636647
CASKY282*Syndromic X-linked intellectual disability Najm type, FG syndrome 4, Syndromic X-linked intellectual disability Najm type,
Anemia, nonspherocytic hemolytic, due to G6PD deficiency
Pathogenic
(Oct 31, 2018)
criteria provided, multiple submitters, no conflicts
52.
GRCh37:
ChrX:41413147
GRCh38:
ChrX:41553894
CASKE622*, E593*, E599*, E616*not provided, Syndromic X-linked intellectual disability Najm typePathogenic
(Jul 12, 2022)
criteria provided, multiple submitters, no conflicts
53.
GRCh37:
ChrX:41383258-41383259
GRCh38:
ChrX:41524005-41524006
CASKF822fs, F845fs, F850fs, F821fsSyndromic X-linked intellectual disability Najm typePathogenic
(Jul 21, 2016)
criteria provided, single submitter
54.
GRCh37:
ChrX:41383203
GRCh38:
ChrX:41523950
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Jul 19, 2017)
criteria provided, single submitter
55.
GRCh37:
ChrX:41524612
GRCh38:
ChrX:41665359
CASKL209PSyndromic X-linked intellectual disability Najm type, not providedPathogenic/Likely pathogenic
(Nov 1, 2017)
criteria provided, multiple submitters, no conflicts
56.
GRCh37:
ChrX:41712472
GRCh38:
ChrX:41853219
CASKF23fsSyndromic X-linked intellectual disability Najm typePathogenic
(Aug 1, 2017)
criteria provided, single submitter
57.
GRCh37:
ChrX:41414858
GRCh38:
ChrX:41555605
CASKR613*, R584*, R590*, R607*not provided, Syndromic X-linked intellectual disability Najm type, Intellectual disability, CASK-related, X-linked
Pathogenic/Likely pathogenic
(Mar 10, 2023)
criteria provided, multiple submitters, no conflicts
58.
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Sep 3, 2016)
criteria provided, single submitter
59.
GRCh37:
ChrX:41437631
GRCh38:
ChrX:41578378
CASKR489W, R483WSmith-Magenis Syndrome-like, not provided, Syndromic X-linked intellectual disability Najm type
Pathogenic/Likely pathogenic
(Jan 18, 2023)
criteria provided, multiple submitters, no conflicts
60.
GRCh37:
ChrX:41390464
GRCh38:
ChrX:41531211
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Sep 9, 2014)
criteria provided, single submitter
61.
GRCh37:
ChrX:41383261-41383262
GRCh38:
ChrX:41524008-41524009
CASKE849fs, E820fs, E821fs, E844fsSyndromic X-linked intellectual disability Najm typePathogenic
(Apr 20, 2015)
criteria provided, single submitter
62.
GRCh37:
ChrX:41390388
GRCh38:
ChrX:41531135
CASKQ793*, Q798*, Q769*, Q770*, Q792*Syndromic X-linked intellectual disability Najm typePathogenic
(Jul 23, 2015)
criteria provided, single submitter
63.
GRCh37:
ChrX:41413030
GRCh38:
ChrX:41553777
CASKL638fs, L661fs, L632fsSyndromic X-linked intellectual disability Najm typePathogenic
(May 8, 2015)
criteria provided, single submitter
64.
GRCh37:
ChrX:41712461
GRCh38:
ChrX:41853208
CASKR27*not provided, Syndromic X-linked intellectual disability Najm typePathogenic
(May 31, 2023)
criteria provided, multiple submitters, no conflicts
65.
GRCh37:
ChrX:41413035
GRCh38:
ChrX:41553782
CASKG659D, G630D, G636D, G653DSyndromic X-linked intellectual disability Najm typePathogenic
(Sep 16, 2022)
criteria provided, single submitter
66.
GRCh37:
ChrX:41495866
GRCh38:
ChrX:41636613
CASKQ294*Syndromic X-linked intellectual disability Najm typePathogenic
(Feb 8, 2013)
criteria provided, single submitter
67.
GRCh37:
ChrX:41712458
GRCh38:
ChrX:41853205
CASKR28*not provided, Inborn genetic diseases, Intellectual disability, CASK-related, X-linked,
Syndromic X-linked intellectual disability Najm type, FG syndrome 4
Pathogenic
(Aug 14, 2023)
criteria provided, multiple submitters, no conflicts
68.
GRCh37:
ChrX:41519759
GRCh38:
ChrX:41660506
CASKR255Hnot provided, FG syndrome 4, Syndromic X-linked intellectual disability Najm type
Conflicting interpretations of pathogenicity
(May 4, 2022)
criteria provided, conflicting interpretations
69.
GRCh37:
ChrX:41524529
GRCh38:
ChrX:41665276
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Feb 8, 2013)
criteria provided, single submitter
70.
GRCh37:
ChrX:41524621
GRCh38:
ChrX:41665368
CASKG206DSyndromic X-linked intellectual disability Najm typeConflicting interpretations of pathogenicity
(Feb 8, 2013)
criteria provided, conflicting interpretations
71.
GRCh37:
ChrX:41530785
GRCh38:
ChrX:41671532
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Feb 8, 2013)
criteria provided, single submitter
72.
GRCh37:
ChrX:41390295
GRCh38:
ChrX:41531042
CASKQ824*, Q800*, Q829*, Q801*, Q823*Syndromic X-linked intellectual disability Najm typePathogenic
(Feb 8, 2013)
criteria provided, single submitter
73.
GRCh37:
ChrX:41782215-41782222
GRCh38:
ChrX:41922962-41922969
CASKL7fsSyndromic X-linked intellectual disability Najm typePathogenic
(Apr 3, 2014)
criteria provided, single submitter
74.
GRCh37:
ChrX:41402025
GRCh38:
ChrX:41542772
CASKQ692*, Q663*, Q669*, Q686*Syndromic X-linked intellectual disability Najm typePathogenic/Likely pathogenic
(Dec 3, 2018)
criteria provided, multiple submitters, no conflicts
75.
GRCh37:
ChrX:41402058
GRCh38:
ChrX:41542805
CASKR681*, R658*, R652*, R675*not provided, Syndromic X-linked intellectual disability Najm typePathogenic
(Jun 3, 2016)
criteria provided, multiple submitters, no conflicts
76.
GRCh37:
ChrX:41412972
GRCh38:
ChrX:41553719
CASKW680S, W657S, W651S, W674SSyndromic X-linked intellectual disability Najm typeUncertain significance
(Feb 8, 2013)
criteria provided, single submitter
77.
GRCh37:
ChrX:41420835-41420836
GRCh38:
ChrX:41561582-41561583
CASKV543fs, V549fsSyndromic X-linked intellectual disability Najm typePathogenic
(Feb 8, 2013)
criteria provided, single submitter
78.
GRCh37:
ChrX:41446205
GRCh38:
ChrX:41586952
CASKSyndromic X-linked intellectual disability Najm typeUncertain significance
(Mar 4, 2013)
criteria provided, single submitter
79.
GRCh37:
ChrX:41420841
GRCh38:
ChrX:41561588
CASKQ547*, Q541*Syndromic X-linked intellectual disability Najm typePathogenic
(Feb 8, 2013)
criteria provided, single submitter
80.
GRCh38:
ChrX:41853228-41923555
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Nov 1, 2011)
no assertion criteria provided
81.
GRCh37:
ChrX:41604817
GRCh38:
ChrX:41745564
CASKR106*not provided, Syndromic X-linked intellectual disability Najm typePathogenic
(Sep 12, 2017)
criteria provided, multiple submitters, no conflicts
82.
GRCh37:
ChrX:41394199
GRCh38:
ChrX:41534946
CASKY728C, Y723C, Y700C, Y699C, Y722CSyndromic X-linked intellectual disability Najm typeLikely pathogenic
(Feb 2, 2015)
criteria provided, single submitter
83.
GRCh37:
ChrX:41448815
GRCh38:
ChrX:41589562
CASKP396S, P390SInborn genetic diseases, not provided, Syndromic X-linked intellectual disability Najm type,
Intellectual disability, CASK-related, X-linked
Conflicting interpretations of pathogenicity
(Oct 11, 2022)
criteria provided, conflicting interpretations
84.
GRCh37:
ChrX:41401970
GRCh38:
ChrX:41542717
CASKD710G, D681G, D687G, D704GSyndromic X-linked intellectual disability Najm type, FG syndrome 4Likely pathogenic
(Mar 8, 2017)
criteria provided, single submitter
85.
GRCh37:
ChrX:41495831
GRCh38:
ChrX:41636578
CASKSyndromic X-linked intellectual disability Najm typePathogenic
(Sep 1, 2008)
no assertion criteria provided
86.
GRCh37:
ChrX:41413096
GRCh38:
ChrX:41553843
CASKR639*, R610*, R616*, R633*not provided, Syndromic X-linked intellectual disability Najm typePathogenic
(Dec 17, 2022)
criteria provided, multiple submitters, no conflicts
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