rehydrate

Name

datasets rehydrate - Rehydrate a downloaded, dehydrated dataset

Synopsis

datasets rehydrate [flags] --directory <directory_name>

Description

Download data files for an unzipped, dehydrated genome data package. Data files specified in fetch.txt will be downloaded from NCBI. Read more about how rehydration can help with large genome downloads: https://www.ncbi.nlm.nih.gov/datasets/docs/v2/how-tos/genomes/large-download/

Options

      --api-key string     Specify an NCBI API key
      --debug              Emit debugging info
      --directory string   Specify the directory containing the unzipped dehydrated bag
      --gzip               rehydrate files to gzip format
      --help               Print detailed help about a datasets command
      --list               List files that would be downloaded during rehydration
      --match string       Specify substring that matches files for rehydration
      --max-workers int    Limit the maximum number of concurrent download workers (allowed range is 1-30) (default 10)
      --no-progressbar     Hide progress bar
      --version            Print version of datasets