SP50644 AND nstd71 - dbVar - NCBI

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Number of Variants: 16

Variant Region ID	Type	Number of Variant Calls	Study ID	Organism	Clinical Assertion	Location	Genes in region
nsv872693	copy number variation	223	nstd71	human		NCBI36 chr1: 187,587,641-187,815,034 , GRCh37.p13 chr1: 189,321,018-189,548,411 , GRCh38.p12 chr1: 189,351,888-189,579,281	LOC105371657
nsv901814	copy number variation	288	nstd71	human		NCBI36 chr14: 43,558,217-43,606,201 , GRCh37.p13 chr14: 44,488,467-44,536,451 , GRCh38.p12 chr14: 44,019,264-44,067,248	LINC02307
nsv884822	copy number variation	2547	nstd71	human		NCBI36 chr6: 32,560,168-32,593,470 , GRCh37.p13 chr6: 32,452,190-32,485,492 , GRCh38.p12 chr6: 32,484,413-32,517,715	HLA-DRB5
nsv889263	copy number variation	249	nstd71	human		NCBI36 chr7: 141,410,335-141,441,259 , GRCh37.p13 chr7\|NW_003571040.1: 206,017-236,941 , GRCh37.p13 chr7: 141,763,866-141,794,790 , GRCh38.p12 chr7: 142,064,066-142,094,990 , GRCh38.p12 chr7\|NT_187562.1: 25,946-56,870	MGAM
nsv880475	copy number variation	143	nstd71	human		NCBI36 chr5: 32,137,157-32,205,304 , GRCh37.p13 chr5: 32,101,400-32,169,547 , GRCh38.p12 chr5: 32,101,294-32,169,441	PDZD2, GOLPH3
nsv885203	copy number variation	52	nstd71	human		NCBI36 chr6: 32,616,207-32,629,229 , GRCh37.p13 chr6: 32,508,229-32,521,251 , GRCh38.p12 chr6: 32,540,452-32,553,474	HLA-DRB6, RNU1-61P
nsv879318	copy number variation	371	nstd71	human		NCBI36 chr4: 69,085,989-69,179,871 , GRCh37.p13 chr4: 69,403,394-69,497,276 , GRCh38.p12 chr4: 68,537,676-68,631,558	LOC728807, UGT2B17, 2 more genes
nsv882084	copy number variation	25	nstd71	human		NCBI36 chr5: 70,232,726-70,300,876 , GRCh37.p13 chr5: 70,196,970-70,265,120 , GRCh38.p12 chr5: 70,901,143-70,969,293	SERF1A, NAIP, 2 more genes
nsv902757	copy number variation	19	nstd71	human		NCBI36 chr15: 19,031,743-19,170,114 , GRCh37.p13 chr: NaN-NaN , GRCh38.p12 chr15\|NT_187604.1: 1-78,445	SPATA31E3P, GOLGA8EP, 1 more genes
nsv881948	copy number variation	2	nstd71	human		NCBI36 chr5: 69,692,210-69,746,725 , GRCh37.p13 chr5: 69,656,454-69,710,969 , GRCh38.p12 chr5: 70,360,627-70,415,142	GTF2H2B, , 1 more genes
nsv881849	copy number variation	1	nstd71	human		NCBI36 chr5: 69,305,468-69,428,601 , GRCh37.p13 chr5: 69,269,712-69,392,845 , GRCh38.p12 chr5\|NT_187651.1: 243,313-322,348 , GRCh38.p12 chr5: 69,973,885-70,097,018	SERF1B, , 6 more genes
nsv890264	copy number variation	52	nstd71	human		NCBI36 chr8: 7,575,048-7,840,086 , GRCh37.p13 chr8: 7,537,638-7,802,676 , GRCh38.p12 chr8: 7,680,116-7,945,154 , GRCh38.p12 chr8\|NW_018654717.1: 5,303,324-5,513,617	FAM90A16, DEFB106A, 40 more genes
nsv890154	copy number variation	12	nstd71	human		NCBI36 chr8: 7,235,238-7,459,302 , GRCh37.p13 chr8: 7,247,828-7,471,892 , GRCh38.p12 chr8\|NT_187570.1: 78,282-297,473 , GRCh38.p12 chr8: 7,390,306-7,614,370	FAM90A22, DEFB106B, 17 more genes
nsv903213	copy number variation	198	nstd71	human		NCBI36 chr15: 19,635,853-19,950,423 , GRCh37.p13 chr15: 21,371,194-22,449,059 , GRCh38.p12 chr15: 21,165,865-22,161,108	OR4H6P, OR4Q1P, 49 more genes
nsv879101	copy number variation	1	nstd71	human		NCBI36 chr4: 64,086,972-64,197,573 , GRCh37.p13 chr4: 64,404,377-64,514,978 , GRCh38.p12 chr4: 63,538,659-63,649,260	0
nsv881425	copy number variation	3	nstd71	human		NCBI36 chr4: 162,085,106-162,138,390 , GRCh37.p13 chr4: 161,865,656-161,918,940 , GRCh38.p12 chr4: 160,944,504-160,997,788	0

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SP50644 AND nstd71 (17)
dbVar
Treponema pallidum subsp. pallidum str. Nichols
Treponema pallidum subsp. pallidum str. Nichols
Causative agent of syphilis

BioProject
5 3eggcsite.comV2L (1)
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