estd209 (Pang et al. 2014b)
- Organism:
- Human
- Study Type:
- Control Set
- Submitter:
- Andy Pang
- Description:
- We observed that current high-throughput sequencing approaches only detected a fraction of the full size-spectrum of insertions, deletions and copy number variants when compared to a previously published, Sanger sequenced human genome. The sensitivity for detection was the lowest in the 100-10,000bp size range, and at DNA repeats, with copy number gains harder to delineate than losses. We discuss strategies for discovering the full spectrum of genetic variation necessary for disease association studies. See Variant Summary counts for estd209 in dbVar Variant Summary.
- Publication(s):
- Pang et al. 2014
Detailed Information: Download 471817 Variant Regions, Download 471817 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Submitted: GRCh37 (hg19)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 36,858 | 36,858 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 38,075 | 38,075 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 31,507 | 31,507 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 33,014 | 33,014 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 28,542 | 28,542 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 29,479 | 29,479 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 26,878 | 26,878 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 22,857 | 22,857 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 18,413 | 18,413 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 23,795 | 23,795 | Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 23,524 | 23,524 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 22,750 | 22,750 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 18,014 | 18,014 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 15,057 | 15,057 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 14,298 | 14,298 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 13,566 | 13,566 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 14,249 | 14,249 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 13,068 | 13,068 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 12,060 | 12,060 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 9,855 | 9,855 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 7,370 | 7,370 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 6,234 | 6,234 | Remapped | NC_000022.11 |
| NC_000023.11 | ChrX | 11,498 | 11,498 | Remapped | NC_000023.11 |
| NC_000024.10 | ChrY | 289 | 289 | Remapped | NC_000024.10 |
| NT_187505.1 | Unplaced|NT_187505.1 | 1 | 1 | Remapped | NT_187505.1 |
| NT_187513.1 | Unplaced|NT_187513.1 | 2 | 2 | Remapped | NT_187513.1 |
| NT_187367.1 | Chr1|NT_187367.1 | 2 | 2 | Remapped | NT_187367.1 |
| NT_187514.1 | Chr1|NT_187514.1 | 22 | 22 | Remapped | NT_187514.1 |
| NT_187515.1 | Chr1|NT_187515.1 | 22 | 22 | Remapped | NT_187515.1 |
| NT_187516.1 | Chr1|NT_187516.1 | 104 | 104 | Remapped | NT_187516.1 |
| NT_187517.1 | Chr1|NT_187517.1 | 2 | 2 | Remapped | NT_187517.1 |
| NT_187518.1 | Chr1|NT_187518.1 | 19 | 19 | Remapped | NT_187518.1 |
| NT_187519.1 | Chr1|NT_187519.1 | 99 | 99 | Remapped | NT_187519.1 |
| NT_187521.1 | Chr1|NT_187521.1 | 7 | 7 | Remapped | NT_187521.1 |
| NT_187646.1 | Chr1|NT_187646.1 | 19 | 19 | Remapped | NT_187646.1 |
| NW_003315905.1 | Chr1|NW_003315905.1 | 37 | 37 | Remapped | NW_003315905.1 |
| NW_003315906.1 | Chr1|NW_003315906.1 | 11 | 11 | Remapped | NW_003315906.1 |
| NW_003315907.2 | Chr1|NW_003315907.2 | 48 | 48 | Remapped | NW_003315907.2 |
| NW_009646194.1 | Chr1|NW_009646194.1 | 33 | 33 | Remapped | NW_009646194.1 |
| NW_009646195.1 | Chr1|NW_009646195.1 | 16 | 16 | Remapped | NW_009646195.1 |
| NW_009646196.1 | Chr1|NW_009646196.1 | 19 | 19 | Remapped | NW_009646196.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 123 | 123 | Remapped | NW_011332687.1 |
| NW_011332688.1 | Chr1|NW_011332688.1 | 85 | 85 | Remapped | NW_011332688.1 |
| NW_012132914.1 | Chr1|NW_012132914.1 | 4 | 4 | Remapped | NW_012132914.1 |
| NW_014040925.1 | Chr1|NW_014040925.1 | 26 | 26 | Remapped | NW_014040925.1 |
| NW_014040926.1 | Chr1|NW_014040926.1 | 77 | 77 | Remapped | NW_014040926.1 |
| NW_014040927.1 | Chr1|NW_014040927.1 | 38 | 38 | Remapped | NW_014040927.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 59 | 59 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 19 | 19 | Remapped | NW_018654706.1 |
| NW_018654707.1 | Chr1|NW_018654707.1 | 19 | 19 | Remapped | NW_018654707.1 |
| NW_018654708.1 | Chr1|NW_018654708.1 | 35 | 35 | Remapped | NW_018654708.1 |
| NW_019805487.1 | Chr1|NW_019805487.1 | 6 | 6 | Remapped | NW_019805487.1 |
| NT_187522.1 | Chr2|NT_187522.1 | 26 | 26 | Remapped | NT_187522.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 19 | 19 | Remapped | NT_187523.1 |
| NT_187524.1 | Chr2|NT_187524.1 | 1 | 1 | Remapped | NT_187524.1 |
| NT_187525.1 | Chr2|NT_187525.1 | 23 | 23 | Remapped | NT_187525.1 |
| NT_187526.1 | Chr2|NT_187526.1 | 24 | 24 | Remapped | NT_187526.1 |
| NT_187527.1 | Chr2|NT_187527.1 | 37 | 37 | Remapped | NT_187527.1 |
| NT_187528.1 | Chr2|NT_187528.1 | 9 | 9 | Remapped | NT_187528.1 |
| NT_187529.1 | Chr2|NT_187529.1 | 15 | 15 | Remapped | NT_187529.1 |
| NT_187530.1 | Chr2|NT_187530.1 | 5 | 5 | Remapped | NT_187530.1 |
| NT_187531.1 | Chr2|NT_187531.1 | 8 | 8 | Remapped | NT_187531.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 19 | 19 | Remapped | NT_187647.1 |
| NT_187648.1 | Chr2|NT_187648.1 | 2 | 2 | Remapped | NT_187648.1 |
| NW_003315908.1 | Chr2|NW_003315908.1 | 18 | 18 | Remapped | NW_003315908.1 |
| NW_003315909.1 | Chr2|NW_003315909.1 | 27 | 27 | Remapped | NW_003315909.1 |
| NW_003571033.2 | Chr2|NW_003571033.2 | 3 | 3 | Remapped | NW_003571033.2 |
| NW_011332689.1 | Chr2|NW_011332689.1 | 46 | 46 | Remapped | NW_011332689.1 |
| NW_011332690.1 | Chr2|NW_011332690.1 | 87 | 87 | Remapped | NW_011332690.1 |
| NW_012132915.1 | Chr2|NW_012132915.1 | 16 | 16 | Remapped | NW_012132915.1 |
| NW_015495299.1 | Chr2|NW_015495299.1 | 108 | 108 | Remapped | NW_015495299.1 |
| NW_018654709.1 | Chr2|NW_018654709.1 | 25 | 25 | Remapped | NW_018654709.1 |
| NW_018654710.1 | Chr2|NW_018654710.1 | 31 | 31 | Remapped | NW_018654710.1 |
| NT_187678.1 | Chr3|NT_187678.1 | 39 | 39 | Remapped | NT_187678.1 |
| NT_187688.1 | Chr3|NT_187688.1 | 40 | 40 | Remapped | NT_187688.1 |
| NT_187689.1 | Chr3|NT_187689.1 | 46 | 46 | Remapped | NT_187689.1 |
| NT_187690.1 | Chr3|NT_187690.1 | 40 | 40 | Remapped | NT_187690.1 |
| NT_187691.1 | Chr3|NT_187691.1 | 40 | 40 | Remapped | NT_187691.1 |
| NT_187532.1 | Chr3|NT_187532.1 | 45 | 45 | Remapped | NT_187532.1 |
| NT_187533.1 | Chr3|NT_187533.1 | 49 | 49 | Remapped | NT_187533.1 |
| NT_187534.1 | Chr3|NT_187534.1 | 28 | 28 | Remapped | NT_187534.1 |
| NT_187535.1 | Chr3|NT_187535.1 | 17 | 17 | Remapped | NT_187535.1 |
| NT_187536.1 | Chr3|NT_187536.1 | 40 | 40 | Remapped | NT_187536.1 |
| NT_187537.1 | Chr3|NT_187537.1 | 31 | 31 | Remapped | NT_187537.1 |
| NT_187538.1 | Chr3|NT_187538.1 | 38 | 38 | Remapped | NT_187538.1 |
| NT_187539.1 | Chr3|NT_187539.1 | 9 | 9 | Remapped | NT_187539.1 |
| NT_187649.1 | Chr3|NT_187649.1 | 40 | 40 | Remapped | NT_187649.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 25 | 25 | Remapped | NW_003315913.1 |
| NW_003871060.2 | Chr3|NW_003871060.2 | 22 | 22 | Remapped | NW_003871060.2 |
| NW_009646197.1 | Chr3|NW_009646197.1 | 43 | 43 | Remapped | NW_009646197.1 |
| NW_011332691.1 | Chr3|NW_011332691.1 | 75 | 75 | Remapped | NW_011332691.1 |
| NW_012132916.1 | Chr3|NW_012132916.1 | 63 | 63 | Remapped | NW_012132916.1 |
| NW_017363813.1 | Chr3|NW_017363813.1 | 44 | 44 | Remapped | NW_017363813.1 |
| NW_018654711.1 | Chr3|NW_018654711.1 | 24 | 24 | Remapped | NW_018654711.1 |
| NW_019805488.1 | Chr3|NW_019805488.1 | 21 | 21 | Remapped | NW_019805488.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 25 | 25 | Remapped | NW_019805489.1 |
| NW_019805490.1 | Chr3|NW_019805490.1 | 31 | 31 | Remapped | NW_019805490.1 |
| NW_019805491.1 | Chr3|NW_019805491.1 | 11 | 11 | Remapped | NW_019805491.1 |
| NW_019805492.1 | Chr3|NW_019805492.1 | 54 | 54 | Remapped | NW_019805492.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 164 | 164 | Remapped | NT_187679.1 |
| NT_113793.3 | Chr4|NT_113793.3 | 5 | 5 | Remapped | NT_113793.3 |
| NT_187540.1 | Chr4|NT_187540.1 | 55 | 55 | Remapped | NT_187540.1 |
| NT_187541.1 | Chr4|NT_187541.1 | 23 | 23 | Remapped | NT_187541.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 18 | 18 | Remapped | NT_187542.1 |
| NT_187543.1 | Chr4|NT_187543.1 | 25 | 25 | Remapped | NT_187543.1 |
| NT_187544.1 | Chr4|NT_187544.1 | 22 | 22 | Remapped | NT_187544.1 |
| NT_187545.1 | Chr4|NT_187545.1 | 54 | 54 | Remapped | NT_187545.1 |
| NT_187650.1 | Chr4|NT_187650.1 | 28 | 28 | Remapped | NT_187650.1 |
| NW_003315914.1 | Chr4|NW_003315914.1 | 46 | 46 | Remapped | NW_003315914.1 |
| NW_003315915.1 | Chr4|NW_003315915.1 | 59 | 59 | Remapped | NW_003315915.1 |
| NW_013171799.1 | Chr4|NW_013171799.1 | 13 | 13 | Remapped | NW_013171799.1 |
| NW_013171800.1 | Chr4|NW_013171800.1 | 21 | 21 | Remapped | NW_013171800.1 |
| NW_013171801.1 | Chr4|NW_013171801.1 | 36 | 36 | Remapped | NW_013171801.1 |
| NW_017363814.1 | Chr4|NW_017363814.1 | 77 | 77 | Remapped | NW_017363814.1 |
| NT_187546.1 | Chr5|NT_187546.1 | 48 | 48 | Remapped | NT_187546.1 |
| NT_187547.1 | Chr5|NT_187547.1 | 37 | 37 | Remapped | NT_187547.1 |
| NT_187548.1 | Chr5|NT_187548.1 | 68 | 68 | Remapped | NT_187548.1 |
| NT_187549.1 | Chr5|NT_187549.1 | 23 | 23 | Remapped | NT_187549.1 |
| NT_187550.1 | Chr5|NT_187550.1 | 13 | 13 | Remapped | NT_187550.1 |
| NT_187551.1 | Chr5|NT_187551.1 | 26 | 26 | Remapped | NT_187551.1 |
| NT_187651.1 | Chr5|NT_187651.1 | 63 | 63 | Remapped | NT_187651.1 |
| NT_187652.1 | Chr5|NT_187652.1 | 49 | 49 | Remapped | NT_187652.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 131 | 131 | Remapped | NW_003315917.2 |
| NW_003315918.1 | Chr5|NW_003315918.1 | 5 | 5 | Remapped | NW_003315918.1 |
| NW_003315919.1 | Chr5|NW_003315919.1 | 40 | 40 | Remapped | NW_003315919.1 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 7 | 7 | Remapped | NW_003315920.1 |
| NW_003571036.1 | Chr5|NW_003571036.1 | 36 | 36 | Remapped | NW_003571036.1 |
| NW_009646199.1 | Chr5|NW_009646199.1 | 29 | 29 | Remapped | NW_009646199.1 |
| NW_016107297.1 | Chr5|NW_016107297.1 | 23 | 23 | Remapped | NW_016107297.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 155 | 155 | Remapped | NW_016107298.1 |
| NW_018654712.1 | Chr5|NW_018654712.1 | 19 | 19 | Remapped | NW_018654712.1 |
| NT_187692.1 | Chr6|NT_187692.1 | 32 | 32 | Remapped | NT_187692.1 |
| NT_187552.1 | Chr6|NT_187552.1 | 13 | 13 | Remapped | NT_187552.1 |
| NT_187553.1 | Chr6|NT_187553.1 | 31 | 31 | Remapped | NT_187553.1 |
| NT_187554.1 | Chr6|NT_187554.1 | 25 | 25 | Remapped | NT_187554.1 |
| NT_187555.1 | Chr6|NT_187555.1 | 58 | 58 | Remapped | NT_187555.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 121 | 121 | Remapped | NT_187556.1 |
| NT_187557.1 | Chr6|NT_187557.1 | 20 | 20 | Remapped | NT_187557.1 |
| NW_003315921.1 | Chr6|NW_003315921.1 | 13 | 13 | Remapped | NW_003315921.1 |
| NW_004166862.2 | Chr6|NW_004166862.2 | 44 | 44 | Remapped | NW_004166862.2 |
| NW_009646200.1 | Chr6|NW_009646200.1 | 65 | 65 | Remapped | NW_009646200.1 |
| NW_012132918.1 | Chr6|NW_012132918.1 | 32 | 32 | Remapped | NW_012132918.1 |
| NW_013171802.1 | Chr6|NW_013171802.1 | 34 | 34 | Remapped | NW_013171802.1 |
| NW_013171803.1 | Chr6|NW_013171803.1 | 17 | 17 | Remapped | NW_013171803.1 |
| NW_017363815.1 | Chr6|NW_017363815.1 | 23 | 23 | Remapped | NW_017363815.1 |
| NW_018654713.1 | Chr6|NW_018654713.1 | 37 | 37 | Remapped | NW_018654713.1 |
| NT_187558.1 | Chr7|NT_187558.1 | 25 | 25 | Remapped | NT_187558.1 |
| NT_187559.1 | Chr7|NT_187559.1 | 26 | 26 | Remapped | NT_187559.1 |
| NT_187560.1 | Chr7|NT_187560.1 | 67 | 67 | Remapped | NT_187560.1 |
| NT_187561.1 | Chr7|NT_187561.1 | 21 | 21 | Remapped | NT_187561.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 151 | 151 | Remapped | NT_187562.1 |
| NT_187563.1 | Chr7|NT_187563.1 | 12 | 12 | Remapped | NT_187563.1 |
| NT_187564.1 | Chr7|NT_187564.1 | 68 | 68 | Remapped | NT_187564.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 27 | 27 | Remapped | NT_187653.1 |
| NW_003315922.2 | Chr7|NW_003315922.2 | 20 | 20 | Remapped | NW_003315922.2 |
| NW_012132919.1 | Chr7|NW_012132919.1 | 36 | 36 | Remapped | NW_012132919.1 |
| NW_017852929.1 | Chr7|NW_017852929.1 | 55 | 55 | Remapped | NW_017852929.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 27 | 27 | Remapped | NW_017852930.1 |
| NW_018654714.1 | Chr7|NW_018654714.1 | 73 | 73 | Remapped | NW_018654714.1 |
| NW_018654715.1 | Chr7|NW_018654715.1 | 83 | 83 | Remapped | NW_018654715.1 |
| NW_019805493.1 | Chr7|NW_019805493.1 | 66 | 66 | Remapped | NW_019805493.1 |
| NT_187680.1 | Chr8|NT_187680.1 | 34 | 34 | Remapped | NT_187680.1 |
| NT_187565.1 | Chr8|NT_187565.1 | 59 | 59 | Remapped | NT_187565.1 |
| NT_187566.1 | Chr8|NT_187566.1 | 2 | 2 | Remapped | NT_187566.1 |
| NT_187567.1 | Chr8|NT_187567.1 | 43 | 43 | Remapped | NT_187567.1 |
| NT_187568.1 | Chr8|NT_187568.1 | 34 | 34 | Remapped | NT_187568.1 |
| NT_187569.1 | Chr8|NT_187569.1 | 14 | 14 | Remapped | NT_187569.1 |
| NT_187570.1 | Chr8|NT_187570.1 | 12 | 12 | Remapped | NT_187570.1 |
| NT_187571.1 | Chr8|NT_187571.1 | 50 | 50 | Remapped | NT_187571.1 |
| NT_187572.1 | Chr8|NT_187572.1 | 17 | 17 | Remapped | NT_187572.1 |
| NT_187573.1 | Chr8|NT_187573.1 | 40 | 40 | Remapped | NT_187573.1 |
| NT_187574.1 | Chr8|NT_187574.1 | 24 | 24 | Remapped | NT_187574.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 242 | 242 | Remapped | NT_187576.1 |
| NT_187577.1 | Chr8|NT_187577.1 | 93 | 93 | Remapped | NT_187577.1 |
| NT_187654.1 | Chr8|NT_187654.1 | 45 | 45 | Remapped | NT_187654.1 |
| NT_187655.1 | Chr8|NT_187655.1 | 25 | 25 | Remapped | NT_187655.1 |
| NW_017852931.1 | Chr8|NW_017852931.1 | 6 | 6 | Remapped | NW_017852931.1 |
| NW_017852932.1 | Chr8|NW_017852932.1 | 51 | 51 | Remapped | NW_017852932.1 |
| NW_018654716.1 | Chr8|NW_018654716.1 | 17 | 17 | Remapped | NW_018654716.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 980 | 980 | Remapped | NW_018654717.1 |
| NW_019805494.1 | Chr8|NW_019805494.1 | 6 | 6 | Remapped | NW_019805494.1 |
| NT_187578.1 | Chr9|NT_187578.1 | 74 | 74 | Remapped | NT_187578.1 |
| NW_003315928.1 | Chr9|NW_003315928.1 | 22 | 22 | Remapped | NW_003315928.1 |
| NW_003315929.1 | Chr9|NW_003315929.1 | 2 | 2 | Remapped | NW_003315929.1 |
| NW_003315930.1 | Chr9|NW_003315930.1 | 20 | 20 | Remapped | NW_003315930.1 |
| NW_003315931.1 | Chr9|NW_003315931.1 | 19 | 19 | Remapped | NW_003315931.1 |
| NW_009646201.1 | Chr9|NW_009646201.1 | 84 | 84 | Remapped | NW_009646201.1 |
| NW_013171804.1 | Chr9|NW_013171804.1 | 28 | 28 | Remapped | NW_013171804.1 |
| NW_013171805.1 | Chr9|NW_013171805.1 | 13 | 13 | Remapped | NW_013171805.1 |
| NT_187579.1 | Chr10|NT_187579.1 | 3 | 3 | Remapped | NT_187579.1 |
| NT_187580.1 | Chr10|NT_187580.1 | 23 | 23 | Remapped | NT_187580.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 46 | 46 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 47 | 47 | Remapped | NW_003315935.1 |
| NW_009646202.1 | Chr10|NW_009646202.1 | 21 | 21 | Remapped | NW_009646202.1 |
| NW_011332692.1 | Chr10|NW_011332692.1 | 2 | 2 | Remapped | NW_011332692.1 |
| NW_013171806.1 | Chr10|NW_013171806.1 | 45 | 45 | Remapped | NW_013171806.1 |
| NW_013171807.1 | Chr10|NW_013171807.1 | 20 | 20 | Remapped | NW_013171807.1 |
| NT_187681.1 | Chr11|NT_187681.1 | 43 | 43 | Remapped | NT_187681.1 |
| NT_187656.1 | Chr11|NT_187656.1 | 17 | 17 | Remapped | NT_187656.1 |
| NT_187657.1 | Chr11|NT_187657.1 | 44 | 44 | Remapped | NT_187657.1 |
| NT_187581.1 | Chr11|NT_187581.1 | 42 | 42 | Remapped | NT_187581.1 |
| NT_187582.1 | Chr11|NT_187582.1 | 13 | 13 | Remapped | NT_187582.1 |
| NT_187583.1 | Chr11|NT_187583.1 | 40 | 40 | Remapped | NT_187583.1 |
| NT_187584.1 | Chr11|NT_187584.1 | 44 | 44 | Remapped | NT_187584.1 |
| NT_187585.1 | Chr11|NT_187585.1 | 52 | 52 | Remapped | NT_187585.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 55 | 55 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 25 | 25 | Remapped | NW_003315936.1 |
| NW_003871073.1 | Chr11|NW_003871073.1 | 25 | 25 | Remapped | NW_003871073.1 |
| NW_003871074.1 | Chr11|NW_003871074.1 | 23 | 23 | Remapped | NW_003871074.1 |
| NW_009646203.1 | Chr11|NW_009646203.1 | 39 | 39 | Remapped | NW_009646203.1 |
| NW_011332695.1 | Chr11|NW_011332695.1 | 40 | 40 | Remapped | NW_011332695.1 |
| NW_013171808.1 | Chr11|NW_013171808.1 | 26 | 26 | Remapped | NW_013171808.1 |
| NW_015148966.1 | Chr11|NW_015148966.1 | 44 | 44 | Remapped | NW_015148966.1 |
| NW_017363816.1 | Chr11|NW_017363816.1 | 26 | 26 | Remapped | NW_017363816.1 |
| NW_019805495.1 | Chr11|NW_019805495.1 | 59 | 59 | Remapped | NW_019805495.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 64 | 64 | Remapped | NW_019805496.1 |
| NW_019805497.1 | Chr11|NW_019805497.1 | 72 | 72 | Remapped | NW_019805497.1 |
| NW_019805498.1 | Chr11|NW_019805498.1 | 16 | 16 | Remapped | NW_019805498.1 |
| NT_187658.1 | Chr12|NT_187658.1 | 122 | 122 | Remapped | NT_187658.1 |
| NT_187587.1 | Chr12|NT_187587.1 | 43 | 43 | Remapped | NT_187587.1 |
| NT_187588.1 | Chr12|NT_187588.1 | 3 | 3 | Remapped | NT_187588.1 |
| NT_187589.1 | Chr12|NT_187589.1 | 14 | 14 | Remapped | NT_187589.1 |
| NT_187590.1 | Chr12|NT_187590.1 | 18 | 18 | Remapped | NT_187590.1 |
| NT_187591.1 | Chr12|NT_187591.1 | 11 | 11 | Remapped | NT_187591.1 |
| NW_003315938.1 | Chr12|NW_003315938.1 | 14 | 14 | Remapped | NW_003315938.1 |
| NW_003315939.2 | Chr12|NW_003315939.2 | 40 | 40 | Remapped | NW_003315939.2 |
| NW_003315940.1 | Chr12|NW_003315940.1 | 17 | 17 | Remapped | NW_003315940.1 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 9 | 9 | Remapped | NW_003315941.1 |
| NW_003315942.2 | Chr12|NW_003315942.2 | 18 | 18 | Remapped | NW_003315942.2 |
| NW_003571049.1 | Chr12|NW_003571049.1 | 20 | 20 | Remapped | NW_003571049.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 91 | 91 | Remapped | NW_003571050.1 |
| NW_009646204.1 | Chr12|NW_009646204.1 | 56 | 56 | Remapped | NW_009646204.1 |
| NW_011332696.1 | Chr12|NW_011332696.1 | 139 | 139 | Remapped | NW_011332696.1 |
| NW_011332697.1 | Chr12|NW_011332697.1 | 17 | 17 | Remapped | NW_011332697.1 |
| NW_013171809.1 | Chr12|NW_013171809.1 | 37 | 37 | Remapped | NW_013171809.1 |
| NW_015148967.1 | Chr12|NW_015148967.1 | 60 | 60 | Remapped | NW_015148967.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 168 | 168 | Remapped | NW_018654718.1 |
| NW_018654719.1 | Chr12|NW_018654719.1 | 6 | 6 | Remapped | NW_018654719.1 |
| NW_018654720.1 | Chr12|NW_018654720.1 | 25 | 25 | Remapped | NW_018654720.1 |
| NW_019805499.1 | Chr12|NW_019805499.1 | 47 | 47 | Remapped | NW_019805499.1 |
| NT_187592.1 | Chr13|NT_187592.1 | 42 | 42 | Remapped | NT_187592.1 |
| NT_187593.1 | Chr13|NT_187593.1 | 38 | 38 | Remapped | NT_187593.1 |
| NT_187594.1 | Chr13|NT_187594.1 | 10 | 10 | Remapped | NT_187594.1 |
| NT_187595.1 | Chr13|NT_187595.1 | 50 | 50 | Remapped | NT_187595.1 |
| NT_187596.1 | Chr13|NT_187596.1 | 10 | 10 | Remapped | NT_187596.1 |
| NT_187597.1 | Chr13|NT_187597.1 | 22 | 22 | Remapped | NT_187597.1 |
| NW_009646205.1 | Chr13|NW_009646205.1 | 19 | 19 | Remapped | NW_009646205.1 |
| NW_011332698.1 | Chr13|NW_011332698.1 | 46 | 46 | Remapped | NW_011332698.1 |
| NW_011332699.1 | Chr13|NW_011332699.1 | 38 | 38 | Remapped | NW_011332699.1 |
| NW_011332700.1 | Chr13|NW_011332700.1 | 25 | 25 | Remapped | NW_011332700.1 |
| NW_013171810.1 | Chr13|NW_013171810.1 | 22 | 22 | Remapped | NW_013171810.1 |
| NW_013171811.1 | Chr13|NW_013171811.1 | 9 | 9 | Remapped | NW_013171811.1 |
| NT_113796.3 | Chr14|NT_113796.3 | 6 | 6 | Remapped | NT_113796.3 |
| NT_187598.1 | Chr14|NT_187598.1 | 74 | 74 | Remapped | NT_187598.1 |
| NT_187599.1 | Chr14|NT_187599.1 | 37 | 37 | Remapped | NT_187599.1 |
| NT_187600.1 | Chr14|NT_187600.1 | 300 | 300 | Remapped | NT_187600.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 230 | 230 | Remapped | NT_187601.1 |
| NW_018654721.1 | Chr14|NW_018654721.1 | 32 | 32 | Remapped | NW_018654721.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 96 | 96 | Remapped | NW_018654722.1 |
| NT_187659.1 | Chr15|NT_187659.1 | 20 | 20 | Remapped | NT_187659.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 509 | 509 | Remapped | NT_187660.1 |
| NT_187602.1 | Chr15|NT_187602.1 | 8 | 8 | Remapped | NT_187602.1 |
| NT_187603.1 | Chr15|NT_187603.1 | 54 | 54 | Remapped | NT_187603.1 |
| NT_187604.1 | Chr15|NT_187604.1 | 11 | 11 | Remapped | NT_187604.1 |
| NT_187605.1 | Chr15|NT_187605.1 | 23 | 23 | Remapped | NT_187605.1 |
| NT_187606.1 | Chr15|NT_187606.1 | 24 | 24 | Remapped | NT_187606.1 |
| NW_003315943.1 | Chr15|NW_003315943.1 | 11 | 11 | Remapped | NW_003315943.1 |
| NW_003315944.2 | Chr15|NW_003315944.2 | 72 | 72 | Remapped | NW_003315944.2 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 521 | 521 | Remapped | NW_011332701.1 |
| NW_012132920.1 | Chr15|NW_012132920.1 | 9 | 9 | Remapped | NW_012132920.1 |
| NT_187383.1 | Chr16|NT_187383.1 | 1 | 1 | Remapped | NT_187383.1 |
| NT_187607.1 | Chr16|NT_187607.1 | 303 | 303 | Remapped | NT_187607.1 |
| NT_187608.1 | Chr16|NT_187608.1 | 15 | 15 | Remapped | NT_187608.1 |
| NT_187609.1 | Chr16|NT_187609.1 | 2 | 2 | Remapped | NT_187609.1 |
| NT_187610.1 | Chr16|NT_187610.1 | 30 | 30 | Remapped | NT_187610.1 |
| NW_003315945.1 | Chr16|NW_003315945.1 | 13 | 13 | Remapped | NW_003315945.1 |
| NW_003315946.1 | Chr16|NW_003315946.1 | 15 | 15 | Remapped | NW_003315946.1 |
| NW_012132921.1 | Chr16|NW_012132921.1 | 21 | 21 | Remapped | NW_012132921.1 |
| NW_013171812.1 | Chr16|NW_013171812.1 | 15 | 15 | Remapped | NW_013171812.1 |
| NW_013171813.1 | Chr16|NW_013171813.1 | 69 | 69 | Remapped | NW_013171813.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 105 | 105 | Remapped | NW_017852933.1 |
| NW_018654723.1 | Chr16|NW_018654723.1 | 19 | 19 | Remapped | NW_018654723.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 92 | 92 | Remapped | NW_019805500.1 |
| NT_187661.1 | Chr17|NT_187661.1 | 21 | 21 | Remapped | NT_187661.1 |
| NT_187662.1 | Chr17|NT_187662.1 | 43 | 43 | Remapped | NT_187662.1 |
| NT_187663.1 | Chr17|NT_187663.1 | 122 | 122 | Remapped | NT_187663.1 |
| NT_187664.1 | Chr17|NT_187664.1 | 29 | 29 | Remapped | NT_187664.1 |
| NW_003871093.1 | Chr17|NW_003871093.1 | 21 | 21 | Remapped | NW_003871093.1 |
| NT_167251.2 | Chr17|NT_167251.2 | 22 | 22 | Remapped | NT_167251.2 |
| NT_187611.1 | Chr17|NT_187611.1 | 44 | 44 | Remapped | NT_187611.1 |
| NT_187612.1 | Chr17|NT_187612.1 | 31 | 31 | Remapped | NT_187612.1 |
| NT_187613.1 | Chr17|NT_187613.1 | 109 | 109 | Remapped | NT_187613.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 453 | 453 | Remapped | NT_187614.1 |
| NT_187615.1 | Chr17|NT_187615.1 | 16 | 16 | Remapped | NT_187615.1 |
| NT_187616.1 | Chr17|NT_187616.1 | 28 | 28 | Remapped | NT_187616.1 |
| NW_003315952.3 | Chr17|NW_003315952.3 | 59 | 59 | Remapped | NW_003315952.3 |
| NW_003315953.2 | Chr17|NW_003315953.2 | 9 | 9 | Remapped | NW_003315953.2 |
| NW_003315954.1 | Chr17|NW_003315954.1 | 26 | 26 | Remapped | NW_003315954.1 |
| NW_003315955.1 | Chr17|NW_003315955.1 | 18 | 18 | Remapped | NW_003315955.1 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 90 | 90 | Remapped | NW_003871091.1 |
| NW_003871092.1 | Chr17|NW_003871092.1 | 21 | 21 | Remapped | NW_003871092.1 |
| NW_016107299.1 | Chr17|NW_016107299.1 | 50 | 50 | Remapped | NW_016107299.1 |
| NW_017363817.1 | Chr17|NW_017363817.1 | 51 | 51 | Remapped | NW_017363817.1 |
| NW_017363818.1 | Chr17|NW_017363818.1 | 29 | 29 | Remapped | NW_017363818.1 |
| NW_017363819.1 | Chr17|NW_017363819.1 | 34 | 34 | Remapped | NW_017363819.1 |
| NW_019805501.1 | Chr17|NW_019805501.1 | 28 | 28 | Remapped | NW_019805501.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 41 | 41 | Remapped | NT_187665.1 |
| NT_187666.1 | Chr18|NT_187666.1 | 22 | 22 | Remapped | NT_187666.1 |
| NT_187617.1 | Chr18|NT_187617.1 | 26 | 26 | Remapped | NT_187617.1 |
| NT_187618.1 | Chr18|NT_187618.1 | 38 | 38 | Remapped | NT_187618.1 |
| NW_003315956.1 | Chr18|NW_003315956.1 | 48 | 48 | Remapped | NW_003315956.1 |
| NW_003315957.1 | Chr18|NW_003315957.1 | 18 | 18 | Remapped | NW_003315957.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 40 | 40 | Remapped | NW_003315958.1 |
| NW_003315959.1 | Chr18|NW_003315959.1 | 17 | 17 | Remapped | NW_003315959.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 29 | 29 | Remapped | NW_003315960.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 23 | 23 | Remapped | NW_003315961.1 |
| NW_013171814.1 | Chr18|NW_013171814.1 | 57 | 57 | Remapped | NW_013171814.1 |
| NW_014040928.1 | Chr18|NW_014040928.1 | 24 | 24 | Remapped | NW_014040928.1 |
| NW_018654724.1 | Chr18|NW_018654724.1 | 13 | 13 | Remapped | NW_018654724.1 |
| NW_019805502.1 | Chr18|NW_019805502.1 | 24 | 24 | Remapped | NW_019805502.1 |
| NW_019805503.1 | Chr18|NW_019805503.1 | 19 | 19 | Remapped | NW_019805503.1 |
| NT_187693.1 | Chr19|NT_187693.1 | 275 | 275 | Remapped | NT_187693.1 |
| NW_003571061.2 | Chr19|NW_003571061.2 | 174 | 174 | Remapped | NW_003571061.2 |
| NW_003571057.2 | Chr19|NW_003571057.2 | 142 | 142 | Remapped | NW_003571057.2 |
| NW_003571058.2 | Chr19|NW_003571058.2 | 142 | 142 | Remapped | NW_003571058.2 |
| NW_003571059.2 | Chr19|NW_003571059.2 | 142 | 142 | Remapped | NW_003571059.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 215 | 215 | Remapped | NW_003571060.1 |
| NW_003571056.2 | Chr19|NW_003571056.2 | 142 | 142 | Remapped | NW_003571056.2 |
| NW_003571055.2 | Chr19|NW_003571055.2 | 163 | 163 | Remapped | NW_003571055.2 |
| NT_187619.1 | Chr19|NT_187619.1 | 3 | 3 | Remapped | NT_187619.1 |
| NT_187620.1 | Chr19|NT_187620.1 | 32 | 32 | Remapped | NT_187620.1 |
| NT_187621.1 | Chr19|NT_187621.1 | 5 | 5 | Remapped | NT_187621.1 |
| NT_187622.1 | Chr19|NT_187622.1 | 13 | 13 | Remapped | NT_187622.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 96 | 96 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 36 | 36 | Remapped | NW_003315963.1 |
| NW_003315964.2 | Chr19|NW_003315964.2 | 69 | 69 | Remapped | NW_003315964.2 |
| NW_003315965.1 | Chr19|NW_003315965.1 | 23 | 23 | Remapped | NW_003315965.1 |
| NW_003571054.1 | Chr19|NW_003571054.1 | 221 | 221 | Remapped | NW_003571054.1 |
| NW_009646206.1 | Chr19|NW_009646206.1 | 49 | 49 | Remapped | NW_009646206.1 |
| NW_014040929.1 | Chr19|NW_014040929.1 | 91 | 91 | Remapped | NW_014040929.1 |
| NT_187623.1 | Chr20|NT_187623.1 | 32 | 32 | Remapped | NT_187623.1 |
| NT_187624.1 | Chr20|NT_187624.1 | 28 | 28 | Remapped | NT_187624.1 |
| NT_187625.1 | Chr20|NT_187625.1 | 11 | 11 | Remapped | NT_187625.1 |
| NW_003315966.2 | Chr20|NW_003315966.2 | 17 | 17 | Remapped | NW_003315966.2 |
| NT_187626.1 | Chr21|NT_187626.1 | 18 | 18 | Remapped | NT_187626.1 |
| NT_187627.1 | Chr21|NT_187627.1 | 52 | 52 | Remapped | NT_187627.1 |
| NT_187628.1 | Chr21|NT_187628.1 | 39 | 39 | Remapped | NT_187628.1 |
| NW_003315967.2 | Chr21|NW_003315967.2 | 6 | 6 | Remapped | NW_003315967.2 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 43 | 43 | Remapped | NW_003315968.2 |
| NW_003315969.2 | Chr21|NW_003315969.2 | 15 | 15 | Remapped | NW_003315969.2 |
| NW_003315970.2 | Chr21|NW_003315970.2 | 42 | 42 | Remapped | NW_003315970.2 |
| NT_187682.1 | Chr22|NT_187682.1 | 9 | 9 | Remapped | NT_187682.1 |
| NW_004504305.1 | Chr22|NW_004504305.1 | 1 | 1 | Remapped | NW_004504305.1 |
| NW_009646207.1 | Chr22|NW_009646207.1 | 1 | 1 | Remapped | NW_009646207.1 |
| NW_015148969.1 | Chr22|NW_015148969.1 | 12 | 12 | Remapped | NW_015148969.1 |
| NT_187629.1 | Chr22|NT_187629.1 | 55 | 55 | Remapped | NT_187629.1 |
| NT_187630.1 | Chr22|NT_187630.1 | 35 | 35 | Remapped | NT_187630.1 |
| NT_187631.1 | Chr22|NT_187631.1 | 22 | 22 | Remapped | NT_187631.1 |
| NT_187632.1 | Chr22|NT_187632.1 | 59 | 59 | Remapped | NT_187632.1 |
| NT_187633.1 | Chr22|NT_187633.1 | 65 | 65 | Remapped | NT_187633.1 |
| NW_003315971.2 | Chr22|NW_003315971.2 | 1 | 1 | Remapped | NW_003315971.2 |
| NW_003315972.2 | Chr22|NW_003315972.2 | 35 | 35 | Remapped | NW_003315972.2 |
| NT_187667.1 | ChrX|NT_187667.1 | 108 | 108 | Remapped | NT_187667.1 |
| NW_017363820.1 | ChrX|NW_017363820.1 | 31 | 31 | Remapped | NW_017363820.1 |
| NT_187634.1 | ChrX|NT_187634.1 | 108 | 108 | Remapped | NT_187634.1 |
| NT_187635.1 | ChrX|NT_187635.1 | 1 | 1 | Remapped | NT_187635.1 |
| NW_009646209.1 | ChrY|NW_009646209.1 | 28 | 28 | Remapped | NW_009646209.1 |
| NW_018654726.1 | ChrY|NW_018654726.1 | 1 | 1 | Remapped | NW_018654726.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 36,935 | 36,935 | Submitted | NC_000001.10 |
| NC_000002.11 | Chr2 | 38,095 | 38,095 | Submitted | NC_000002.11 |
| NC_000003.11 | Chr3 | 31,521 | 31,521 | Submitted | NC_000003.11 |
| NC_000004.11 | Chr4 | 33,019 | 33,019 | Submitted | NC_000004.11 |
| NC_000005.9 | Chr5 | 28,542 | 28,542 | Submitted | NC_000005.9 |
| NC_000006.11 | Chr6 | 29,487 | 29,487 | Submitted | NC_000006.11 |
| NC_000007.13 | Chr7 | 26,918 | 26,918 | Submitted | NC_000007.13 |
| NC_000008.10 | Chr8 | 22,932 | 22,932 | Submitted | NC_000008.10 |
| NC_000009.11 | Chr9 | 18,420 | 18,420 | Submitted | NC_000009.11 |
| NC_000010.10 | Chr10 | 23,803 | 23,803 | Submitted | NC_000010.10 |
| NC_000011.9 | Chr11 | 23,531 | 23,531 | Submitted | NC_000011.9 |
| NC_000012.11 | Chr12 | 22,764 | 22,764 | Submitted | NC_000012.11 |
| NC_000013.10 | Chr13 | 18,024 | 18,024 | Submitted | NC_000013.10 |
| NC_000014.8 | Chr14 | 15,087 | 15,087 | Submitted | NC_000014.8 |
| NC_000015.9 | Chr15 | 14,303 | 14,303 | Submitted | NC_000015.9 |
| NC_000016.9 | Chr16 | 13,567 | 13,567 | Submitted | NC_000016.9 |
| NC_000017.10 | Chr17 | 14,301 | 14,301 | Submitted | NC_000017.10 |
| NC_000018.9 | Chr18 | 13,070 | 13,070 | Submitted | NC_000018.9 |
| NC_000019.9 | Chr19 | 12,128 | 12,128 | Submitted | NC_000019.9 |
| NC_000020.10 | Chr20 | 9,860 | 9,860 | Submitted | NC_000020.10 |
| NC_000021.8 | Chr21 | 7,372 | 7,372 | Submitted | NC_000021.8 |
| NC_000022.10 | Chr22 | 6,286 | 6,286 | Submitted | NC_000022.10 |
| NC_000023.10 | ChrX | 11,559 | 11,559 | Submitted | NC_000023.10 |
| NC_000024.9 | ChrY | 293 | 293 | Submitted | NC_000024.9 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.10 | Chr1 | 36,935 | 35,793 | 15 | 137 | 63 | 927 | 36,935 | 35,793 | 15 | 137 | 63 | 927 |
| NC_000002.11 | Chr2 | 38,095 | 37,519 | 1 | 32 | 13 | 529 | 38,095 | 37,519 | 1 | 32 | 13 | 529 |
| NC_000003.11 | Chr3 | 31,521 | 30,744 | 0 | 67 | 13 | 697 | 31,521 | 30,744 | 0 | 67 | 13 | 697 |
| NC_000004.11 | Chr4 | 33,019 | 32,396 | 1 | 25 | 5 | 592 | 33,019 | 32,396 | 1 | 25 | 5 | 592 |
| NC_000005.9 | Chr5 | 28,542 | 27,854 | 0 | 13 | 0 | 675 | 28,542 | 27,854 | 0 | 13 | 0 | 675 |
| NC_000006.11 | Chr6 | 29,487 | 28,887 | 0 | 27 | 8 | 565 | 29,487 | 28,887 | 0 | 27 | 8 | 565 |
| NC_000007.13 | Chr7 | 26,918 | 26,088 | 1 | 81 | 20 | 728 | 26,918 | 26,088 | 1 | 81 | 20 | 728 |
| NC_000008.10 | Chr8 | 22,932 | 21,160 | 0 | 64 | 21 | 1,687 | 22,932 | 21,160 | 0 | 64 | 21 | 1,687 |
| NC_000009.11 | Chr9 | 18,420 | 18,129 | 2 | 10 | 8 | 271 | 18,420 | 18,129 | 2 | 10 | 8 | 271 |
| NC_000010.10 | Chr10 | 23,803 | 23,547 | 1 | 40 | 8 | 207 | 23,803 | 23,547 | 1 | 40 | 8 | 207 |
| NC_000011.9 | Chr11 | 23,531 | 22,779 | 1 | 61 | 6 | 684 | 23,531 | 22,779 | 1 | 61 | 6 | 684 |
| NC_000012.11 | Chr12 | 22,764 | 21,848 | 1 | 7 | 12 | 896 | 22,764 | 21,848 | 1 | 7 | 12 | 896 |
| NC_000013.10 | Chr13 | 18,024 | 17,730 | 0 | 7 | 0 | 287 | 18,024 | 17,730 | 0 | 7 | 0 | 287 |
| NC_000014.8 | Chr14 | 15,087 | 14,165 | 0 | 128 | 29 | 765 | 15,087 | 14,165 | 0 | 128 | 29 | 765 |
| NC_000015.9 | Chr15 | 14,303 | 13,561 | 0 | 18 | 4 | 720 | 14,303 | 13,561 | 0 | 18 | 4 | 720 |
| NC_000016.9 | Chr16 | 13,567 | 12,860 | 0 | 8 | 1 | 698 | 13,567 | 12,860 | 0 | 8 | 1 | 698 |
| NC_000017.10 | Chr17 | 14,301 | 13,110 | 0 | 29 | 7 | 1,155 | 14,301 | 13,110 | 0 | 29 | 7 | 1,155 |
| NC_000018.9 | Chr18 | 13,070 | 12,659 | 1 | 31 | 2 | 377 | 13,070 | 12,659 | 1 | 31 | 2 | 377 |
| NC_000019.9 | Chr19 | 12,128 | 11,410 | 0 | 52 | 14 | 652 | 12,128 | 11,410 | 0 | 52 | 14 | 652 |
| NC_000020.10 | Chr20 | 9,860 | 9,738 | 0 | 29 | 5 | 88 | 9,860 | 9,738 | 0 | 29 | 5 | 88 |
| NC_000021.8 | Chr21 | 7,372 | 7,038 | 0 | 95 | 3 | 236 | 7,372 | 7,038 | 0 | 95 | 3 | 236 |
| NC_000022.10 | Chr22 | 6,286 | 5,903 | 0 | 79 | 37 | 267 | 6,286 | 5,903 | 0 | 79 | 37 | 267 |
| NC_000023.10 | ChrX | 11,559 | 11,178 | 1 | 179 | 61 | 140 | 11,559 | 11,178 | 1 | 179 | 61 | 140 |
| NC_000024.9 | ChrY | 293 | 255 | 0 | 5 | 4 | 29 | 293 | 255 | 0 | 5 | 4 | 29 |
Samplesets
Number of Samplesets: 1
- Name:
- HuRef
- Size:
- 1
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
- Sex:
- Male
| Sample ID | Cell Type | Subject ID | Sex | Ethnicity | Subject Phenotype |
|---|---|---|---|---|---|
| HuRef | Fibroblast | HuRef | Male | Caucasian | Not reported |
Experimental Details
| Experiment ID | Type | Method | Analysis | Platforms | Number of Variant Calls |
|---|---|---|---|---|---|
| 1 | Discovery | Sequencing | Read depth | Complete Genomics | 256 |
| 2 | Discovery | Sequencing | Paired-end mapping | Complete Genomics | 1,072 |
| 3 | Discovery | Sequencing | Split read mapping | Complete Genomics | 470,489 |