nstd128 (Mallick et al. 2016)
- Organism:
- Human
- Study Type:
- Collection
- Submitter:
- Melissa Gymrek
- Description:
- We report high quality genomes from 300 individuals from 142 diverse populations. As part of this study, we generated a comprehensive catalog of short tandem repeat (STR) genotypes. We used this call set to characterize allele frequency spectra, analyze sequence determinants of STR variation, and to identify common loss of function alleles. See Variant Summary counts for nstd128 in dbVar Variant Summary.
- Publication(s):
- Mallick et al. 2016
Detailed Information: Download 1328521 Variant Regions, Download 4394628 Variant Calls, Download Both, FTP
Variant Summary
Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Submitted: GRCh37 (hg19)
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.11 | Chr1 | 108,471 | 354,653 | Remapped | NC_000001.11 |
| NC_000002.12 | Chr2 | 107,061 | 354,184 | Remapped | NC_000002.12 |
| NC_000003.12 | Chr3 | 88,603 | 296,161 | Remapped | NC_000003.12 |
| NC_000004.12 | Chr4 | 82,083 | 274,199 | Remapped | NC_000004.12 |
| NC_000005.10 | Chr5 | 78,035 | 261,419 | Remapped | NC_000005.10 |
| NC_000006.12 | Chr6 | 76,845 | 259,296 | Remapped | NC_000006.12 |
| NC_000007.14 | Chr7 | 71,866 | 240,640 | Remapped | NC_000007.14 |
| NC_000008.11 | Chr8 | 64,622 | 213,493 | Remapped | NC_000008.11 |
| NC_000009.12 | Chr9 | 52,283 | 174,943 | Remapped | NC_000009.12 |
| NC_000010.11 | Chr10 | 61,724 | 206,329 | Remapped | NC_000010.11 |
| NC_000011.10 | Chr11 | 58,770 | 194,279 | Remapped | NC_000011.10 |
| NC_000012.12 | Chr12 | 65,869 | 216,801 | Remapped | NC_000012.12 |
| NC_000013.11 | Chr13 | 42,524 | 144,450 | Remapped | NC_000013.11 |
| NC_000014.9 | Chr14 | 42,183 | 141,737 | Remapped | NC_000014.9 |
| NC_000015.10 | Chr15 | 38,463 | 129,979 | Remapped | NC_000015.10 |
| NC_000016.10 | Chr16 | 41,662 | 135,776 | Remapped | NC_000016.10 |
| NC_000017.11 | Chr17 | 45,371 | 149,462 | Remapped | NC_000017.11 |
| NC_000018.10 | Chr18 | 33,627 | 113,725 | Remapped | NC_000018.10 |
| NC_000019.10 | Chr19 | 39,205 | 128,130 | Remapped | NC_000019.10 |
| NC_000020.11 | Chr20 | 30,109 | 97,913 | Remapped | NC_000020.11 |
| NC_000021.9 | Chr21 | 15,687 | 54,527 | Remapped | NC_000021.9 |
| NC_000022.11 | Chr22 | 18,586 | 61,198 | Remapped | NC_000022.11 |
| NC_000023.11 | ChrX | 59,422 | 179,075 | Remapped | NC_000023.11 |
| NC_000024.10 | ChrY | 5,218 | 11,229 | Remapped | NC_000024.10 |
| NT_187513.1 | Unplaced|NT_187513.1 | 2 | 17 | Remapped | NT_187513.1 |
| NT_187361.1 | Chr1|NT_187361.1 | 6 | 45 | Remapped | NT_187361.1 |
| NT_187514.1 | Chr1|NT_187514.1 | 30 | 109 | Remapped | NT_187514.1 |
| NT_187515.1 | Chr1|NT_187515.1 | 62 | 170 | Remapped | NT_187515.1 |
| NT_187516.1 | Chr1|NT_187516.1 | 234 | 855 | Remapped | NT_187516.1 |
| NT_187517.1 | Chr1|NT_187517.1 | 1 | 3 | Remapped | NT_187517.1 |
| NT_187518.1 | Chr1|NT_187518.1 | 34 | 147 | Remapped | NT_187518.1 |
| NT_187519.1 | Chr1|NT_187519.1 | 313 | 964 | Remapped | NT_187519.1 |
| NT_187520.1 | Chr1|NT_187520.1 | 4 | 32 | Remapped | NT_187520.1 |
| NT_187521.1 | Chr1|NT_187521.1 | 17 | 60 | Remapped | NT_187521.1 |
| NT_187646.1 | Chr1|NT_187646.1 | 34 | 147 | Remapped | NT_187646.1 |
| NW_003315905.1 | Chr1|NW_003315905.1 | 110 | 360 | Remapped | NW_003315905.1 |
| NW_003315906.1 | Chr1|NW_003315906.1 | 47 | 125 | Remapped | NW_003315906.1 |
| NW_003315907.2 | Chr1|NW_003315907.2 | 177 | 622 | Remapped | NW_003315907.2 |
| NW_009646194.1 | Chr1|NW_009646194.1 | 84 | 264 | Remapped | NW_009646194.1 |
| NW_009646195.1 | Chr1|NW_009646195.1 | 139 | 404 | Remapped | NW_009646195.1 |
| NW_009646196.1 | Chr1|NW_009646196.1 | 96 | 305 | Remapped | NW_009646196.1 |
| NW_011332687.1 | Chr1|NW_011332687.1 | 202 | 712 | Remapped | NW_011332687.1 |
| NW_011332688.1 | Chr1|NW_011332688.1 | 161 | 552 | Remapped | NW_011332688.1 |
| NW_012132914.1 | Chr1|NW_012132914.1 | 11 | 37 | Remapped | NW_012132914.1 |
| NW_014040925.1 | Chr1|NW_014040925.1 | 45 | 139 | Remapped | NW_014040925.1 |
| NW_014040926.1 | Chr1|NW_014040926.1 | 246 | 797 | Remapped | NW_014040926.1 |
| NW_014040927.1 | Chr1|NW_014040927.1 | 147 | 451 | Remapped | NW_014040927.1 |
| NW_017852928.1 | Chr1|NW_017852928.1 | 131 | 497 | Remapped | NW_017852928.1 |
| NW_018654706.1 | Chr1|NW_018654706.1 | 177 | 487 | Remapped | NW_018654706.1 |
| NW_018654707.1 | Chr1|NW_018654707.1 | 37 | 136 | Remapped | NW_018654707.1 |
| NW_018654708.1 | Chr1|NW_018654708.1 | 113 | 333 | Remapped | NW_018654708.1 |
| NW_019805487.1 | Chr1|NW_019805487.1 | 11 | 42 | Remapped | NW_019805487.1 |
| NT_187522.1 | Chr2|NT_187522.1 | 44 | 132 | Remapped | NT_187522.1 |
| NT_187523.1 | Chr2|NT_187523.1 | 29 | 121 | Remapped | NT_187523.1 |
| NT_187524.1 | Chr2|NT_187524.1 | 2 | 19 | Remapped | NT_187524.1 |
| NT_187525.1 | Chr2|NT_187525.1 | 25 | 98 | Remapped | NT_187525.1 |
| NT_187526.1 | Chr2|NT_187526.1 | 23 | 47 | Remapped | NT_187526.1 |
| NT_187527.1 | Chr2|NT_187527.1 | 62 | 164 | Remapped | NT_187527.1 |
| NT_187528.1 | Chr2|NT_187528.1 | 24 | 120 | Remapped | NT_187528.1 |
| NT_187529.1 | Chr2|NT_187529.1 | 53 | 182 | Remapped | NT_187529.1 |
| NT_187530.1 | Chr2|NT_187530.1 | 44 | 174 | Remapped | NT_187530.1 |
| NT_187531.1 | Chr2|NT_187531.1 | 67 | 250 | Remapped | NT_187531.1 |
| NT_187647.1 | Chr2|NT_187647.1 | 29 | 121 | Remapped | NT_187647.1 |
| NT_187648.1 | Chr2|NT_187648.1 | 1 | 6 | Remapped | NT_187648.1 |
| NW_003315908.1 | Chr2|NW_003315908.1 | 62 | 201 | Remapped | NW_003315908.1 |
| NW_003315909.1 | Chr2|NW_003315909.1 | 40 | 150 | Remapped | NW_003315909.1 |
| NW_003571033.2 | Chr2|NW_003571033.2 | 47 | 149 | Remapped | NW_003571033.2 |
| NW_011332689.1 | Chr2|NW_011332689.1 | 55 | 190 | Remapped | NW_011332689.1 |
| NW_011332690.1 | Chr2|NW_011332690.1 | 233 | 766 | Remapped | NW_011332690.1 |
| NW_012132915.1 | Chr2|NW_012132915.1 | 52 | 208 | Remapped | NW_012132915.1 |
| NW_015495299.1 | Chr2|NW_015495299.1 | 366 | 1,204 | Remapped | NW_015495299.1 |
| NW_018654709.1 | Chr2|NW_018654709.1 | 76 | 218 | Remapped | NW_018654709.1 |
| NW_018654710.1 | Chr2|NW_018654710.1 | 105 | 341 | Remapped | NW_018654710.1 |
| NT_187678.1 | Chr3|NT_187678.1 | 49 | 272 | Remapped | NT_187678.1 |
| NT_187688.1 | Chr3|NT_187688.1 | 48 | 265 | Remapped | NT_187688.1 |
| NT_187689.1 | Chr3|NT_187689.1 | 66 | 327 | Remapped | NT_187689.1 |
| NT_187690.1 | Chr3|NT_187690.1 | 48 | 265 | Remapped | NT_187690.1 |
| NT_187691.1 | Chr3|NT_187691.1 | 48 | 253 | Remapped | NT_187691.1 |
| NT_187532.1 | Chr3|NT_187532.1 | 66 | 327 | Remapped | NT_187532.1 |
| NT_187533.1 | Chr3|NT_187533.1 | 70 | 271 | Remapped | NT_187533.1 |
| NT_187534.1 | Chr3|NT_187534.1 | 80 | 238 | Remapped | NT_187534.1 |
| NT_187535.1 | Chr3|NT_187535.1 | 42 | 128 | Remapped | NT_187535.1 |
| NT_187536.1 | Chr3|NT_187536.1 | 103 | 335 | Remapped | NT_187536.1 |
| NT_187537.1 | Chr3|NT_187537.1 | 42 | 181 | Remapped | NT_187537.1 |
| NT_187538.1 | Chr3|NT_187538.1 | 79 | 301 | Remapped | NT_187538.1 |
| NT_187539.1 | Chr3|NT_187539.1 | 33 | 118 | Remapped | NT_187539.1 |
| NT_187649.1 | Chr3|NT_187649.1 | 48 | 265 | Remapped | NT_187649.1 |
| NW_003315913.1 | Chr3|NW_003315913.1 | 87 | 317 | Remapped | NW_003315913.1 |
| NW_003871060.2 | Chr3|NW_003871060.2 | 82 | 257 | Remapped | NW_003871060.2 |
| NW_009646197.1 | Chr3|NW_009646197.1 | 246 | 749 | Remapped | NW_009646197.1 |
| NW_011332691.1 | Chr3|NW_011332691.1 | 240 | 716 | Remapped | NW_011332691.1 |
| NW_012132916.1 | Chr3|NW_012132916.1 | 169 | 560 | Remapped | NW_012132916.1 |
| NW_017363813.1 | Chr3|NW_017363813.1 | 127 | 430 | Remapped | NW_017363813.1 |
| NW_018654711.1 | Chr3|NW_018654711.1 | 89 | 275 | Remapped | NW_018654711.1 |
| NW_019805488.1 | Chr3|NW_019805488.1 | 66 | 230 | Remapped | NW_019805488.1 |
| NW_019805489.1 | Chr3|NW_019805489.1 | 95 | 392 | Remapped | NW_019805489.1 |
| NW_019805490.1 | Chr3|NW_019805490.1 | 100 | 256 | Remapped | NW_019805490.1 |
| NW_019805491.1 | Chr3|NW_019805491.1 | 47 | 166 | Remapped | NW_019805491.1 |
| NW_019805492.1 | Chr3|NW_019805492.1 | 63 | 261 | Remapped | NW_019805492.1 |
| NT_187679.1 | Chr4|NT_187679.1 | 137 | 488 | Remapped | NT_187679.1 |
| NT_113793.3 | Chr4|NT_113793.3 | 22 | 121 | Remapped | NT_113793.3 |
| NT_187540.1 | Chr4|NT_187540.1 | 79 | 252 | Remapped | NT_187540.1 |
| NT_187541.1 | Chr4|NT_187541.1 | 47 | 146 | Remapped | NT_187541.1 |
| NT_187542.1 | Chr4|NT_187542.1 | 49 | 150 | Remapped | NT_187542.1 |
| NT_187543.1 | Chr4|NT_187543.1 | 42 | 117 | Remapped | NT_187543.1 |
| NT_187544.1 | Chr4|NT_187544.1 | 51 | 226 | Remapped | NT_187544.1 |
| NT_187545.1 | Chr4|NT_187545.1 | 117 | 424 | Remapped | NT_187545.1 |
| NT_187650.1 | Chr4|NT_187650.1 | 48 | 130 | Remapped | NT_187650.1 |
| NW_003315914.1 | Chr4|NW_003315914.1 | 57 | 179 | Remapped | NW_003315914.1 |
| NW_003315915.1 | Chr4|NW_003315915.1 | 176 | 501 | Remapped | NW_003315915.1 |
| NW_013171799.1 | Chr4|NW_013171799.1 | 41 | 132 | Remapped | NW_013171799.1 |
| NW_013171800.1 | Chr4|NW_013171800.1 | 72 | 228 | Remapped | NW_013171800.1 |
| NW_013171801.1 | Chr4|NW_013171801.1 | 91 | 241 | Remapped | NW_013171801.1 |
| NW_017363814.1 | Chr4|NW_017363814.1 | 140 | 431 | Remapped | NW_017363814.1 |
| NT_187546.1 | Chr5|NT_187546.1 | 33 | 172 | Remapped | NT_187546.1 |
| NT_187547.1 | Chr5|NT_187547.1 | 51 | 170 | Remapped | NT_187547.1 |
| NT_187548.1 | Chr5|NT_187548.1 | 44 | 146 | Remapped | NT_187548.1 |
| NT_187549.1 | Chr5|NT_187549.1 | 79 | 260 | Remapped | NT_187549.1 |
| NT_187550.1 | Chr5|NT_187550.1 | 31 | 84 | Remapped | NT_187550.1 |
| NT_187551.1 | Chr5|NT_187551.1 | 61 | 214 | Remapped | NT_187551.1 |
| NT_187651.1 | Chr5|NT_187651.1 | 146 | 452 | Remapped | NT_187651.1 |
| NT_187652.1 | Chr5|NT_187652.1 | 30 | 144 | Remapped | NT_187652.1 |
| NW_003315917.2 | Chr5|NW_003315917.2 | 443 | 1,361 | Remapped | NW_003315917.2 |
| NW_003315918.1 | Chr5|NW_003315918.1 | 34 | 99 | Remapped | NW_003315918.1 |
| NW_003315919.1 | Chr5|NW_003315919.1 | 74 | 274 | Remapped | NW_003315919.1 |
| NW_003315920.1 | Chr5|NW_003315920.1 | 25 | 101 | Remapped | NW_003315920.1 |
| NW_003571036.1 | Chr5|NW_003571036.1 | 93 | 297 | Remapped | NW_003571036.1 |
| NW_009646199.1 | Chr5|NW_009646199.1 | 49 | 142 | Remapped | NW_009646199.1 |
| NW_016107297.1 | Chr5|NW_016107297.1 | 76 | 249 | Remapped | NW_016107297.1 |
| NW_016107298.1 | Chr5|NW_016107298.1 | 415 | 1,277 | Remapped | NW_016107298.1 |
| NW_018654712.1 | Chr5|NW_018654712.1 | 51 | 153 | Remapped | NW_018654712.1 |
| NT_187692.1 | Chr6|NT_187692.1 | 17 | 85 | Remapped | NT_187692.1 |
| NT_187552.1 | Chr6|NT_187552.1 | 49 | 125 | Remapped | NT_187552.1 |
| NT_187553.1 | Chr6|NT_187553.1 | 91 | 250 | Remapped | NT_187553.1 |
| NT_187554.1 | Chr6|NT_187554.1 | 53 | 162 | Remapped | NT_187554.1 |
| NT_187555.1 | Chr6|NT_187555.1 | 63 | 215 | Remapped | NT_187555.1 |
| NT_187556.1 | Chr6|NT_187556.1 | 376 | 1,137 | Remapped | NT_187556.1 |
| NT_187557.1 | Chr6|NT_187557.1 | 30 | 117 | Remapped | NT_187557.1 |
| NW_003315921.1 | Chr6|NW_003315921.1 | 25 | 57 | Remapped | NW_003315921.1 |
| NW_004166862.2 | Chr6|NW_004166862.2 | 52 | 173 | Remapped | NW_004166862.2 |
| NW_009646200.1 | Chr6|NW_009646200.1 | 118 | 380 | Remapped | NW_009646200.1 |
| NW_012132918.1 | Chr6|NW_012132918.1 | 42 | 154 | Remapped | NW_012132918.1 |
| NW_013171802.1 | Chr6|NW_013171802.1 | 146 | 455 | Remapped | NW_013171802.1 |
| NW_013171803.1 | Chr6|NW_013171803.1 | 37 | 94 | Remapped | NW_013171803.1 |
| NW_017363815.1 | Chr6|NW_017363815.1 | 110 | 353 | Remapped | NW_017363815.1 |
| NW_018654713.1 | Chr6|NW_018654713.1 | 164 | 578 | Remapped | NW_018654713.1 |
| NT_187558.1 | Chr7|NT_187558.1 | 41 | 95 | Remapped | NT_187558.1 |
| NT_187559.1 | Chr7|NT_187559.1 | 61 | 205 | Remapped | NT_187559.1 |
| NT_187560.1 | Chr7|NT_187560.1 | 59 | 179 | Remapped | NT_187560.1 |
| NT_187561.1 | Chr7|NT_187561.1 | 19 | 80 | Remapped | NT_187561.1 |
| NT_187562.1 | Chr7|NT_187562.1 | 340 | 1,151 | Remapped | NT_187562.1 |
| NT_187563.1 | Chr7|NT_187563.1 | 36 | 92 | Remapped | NT_187563.1 |
| NT_187564.1 | Chr7|NT_187564.1 | 129 | 474 | Remapped | NT_187564.1 |
| NT_187653.1 | Chr7|NT_187653.1 | 41 | 95 | Remapped | NT_187653.1 |
| NW_003315922.2 | Chr7|NW_003315922.2 | 49 | 160 | Remapped | NW_003315922.2 |
| NW_012132919.1 | Chr7|NW_012132919.1 | 85 | 259 | Remapped | NW_012132919.1 |
| NW_017852929.1 | Chr7|NW_017852929.1 | 105 | 355 | Remapped | NW_017852929.1 |
| NW_017852930.1 | Chr7|NW_017852930.1 | 228 | 720 | Remapped | NW_017852930.1 |
| NW_018654714.1 | Chr7|NW_018654714.1 | 123 | 408 | Remapped | NW_018654714.1 |
| NW_018654715.1 | Chr7|NW_018654715.1 | 165 | 566 | Remapped | NW_018654715.1 |
| NW_019805493.1 | Chr7|NW_019805493.1 | 80 | 294 | Remapped | NW_019805493.1 |
| NT_187680.1 | Chr8|NT_187680.1 | 105 | 287 | Remapped | NT_187680.1 |
| NT_187565.1 | Chr8|NT_187565.1 | 78 | 265 | Remapped | NT_187565.1 |
| NT_187566.1 | Chr8|NT_187566.1 | 28 | 101 | Remapped | NT_187566.1 |
| NT_187567.1 | Chr8|NT_187567.1 | 147 | 516 | Remapped | NT_187567.1 |
| NT_187568.1 | Chr8|NT_187568.1 | 54 | 168 | Remapped | NT_187568.1 |
| NT_187569.1 | Chr8|NT_187569.1 | 66 | 187 | Remapped | NT_187569.1 |
| NT_187570.1 | Chr8|NT_187570.1 | 8 | 29 | Remapped | NT_187570.1 |
| NT_187571.1 | Chr8|NT_187571.1 | 128 | 399 | Remapped | NT_187571.1 |
| NT_187572.1 | Chr8|NT_187572.1 | 42 | 140 | Remapped | NT_187572.1 |
| NT_187573.1 | Chr8|NT_187573.1 | 75 | 249 | Remapped | NT_187573.1 |
| NT_187574.1 | Chr8|NT_187574.1 | 29 | 103 | Remapped | NT_187574.1 |
| NT_187575.1 | Chr8|NT_187575.1 | 9 | 30 | Remapped | NT_187575.1 |
| NT_187576.1 | Chr8|NT_187576.1 | 353 | 1,227 | Remapped | NT_187576.1 |
| NT_187577.1 | Chr8|NT_187577.1 | 245 | 744 | Remapped | NT_187577.1 |
| NT_187654.1 | Chr8|NT_187654.1 | 96 | 295 | Remapped | NT_187654.1 |
| NT_187655.1 | Chr8|NT_187655.1 | 33 | 108 | Remapped | NT_187655.1 |
| NW_017852931.1 | Chr8|NW_017852931.1 | 55 | 204 | Remapped | NW_017852931.1 |
| NW_017852932.1 | Chr8|NW_017852932.1 | 104 | 326 | Remapped | NW_017852932.1 |
| NW_018654716.1 | Chr8|NW_018654716.1 | 85 | 263 | Remapped | NW_018654716.1 |
| NW_018654717.1 | Chr8|NW_018654717.1 | 2,381 | 8,061 | Remapped | NW_018654717.1 |
| NW_019805494.1 | Chr8|NW_019805494.1 | 38 | 157 | Remapped | NW_019805494.1 |
| NT_187578.1 | Chr9|NT_187578.1 | 162 | 597 | Remapped | NT_187578.1 |
| NW_003315928.1 | Chr9|NW_003315928.1 | 46 | 185 | Remapped | NW_003315928.1 |
| NW_003315929.1 | Chr9|NW_003315929.1 | 11 | 40 | Remapped | NW_003315929.1 |
| NW_003315930.1 | Chr9|NW_003315930.1 | 79 | 240 | Remapped | NW_003315930.1 |
| NW_003315931.1 | Chr9|NW_003315931.1 | 34 | 113 | Remapped | NW_003315931.1 |
| NW_009646201.1 | Chr9|NW_009646201.1 | 157 | 497 | Remapped | NW_009646201.1 |
| NW_013171804.1 | Chr9|NW_013171804.1 | 68 | 199 | Remapped | NW_013171804.1 |
| NW_013171805.1 | Chr9|NW_013171805.1 | 49 | 194 | Remapped | NW_013171805.1 |
| NT_187579.1 | Chr10|NT_187579.1 | 16 | 37 | Remapped | NT_187579.1 |
| NT_187580.1 | Chr10|NT_187580.1 | 79 | 279 | Remapped | NT_187580.1 |
| NW_003315934.1 | Chr10|NW_003315934.1 | 70 | 290 | Remapped | NW_003315934.1 |
| NW_003315935.1 | Chr10|NW_003315935.1 | 87 | 317 | Remapped | NW_003315935.1 |
| NW_009646202.1 | Chr10|NW_009646202.1 | 181 | 519 | Remapped | NW_009646202.1 |
| NW_011332692.1 | Chr10|NW_011332692.1 | 4 | 22 | Remapped | NW_011332692.1 |
| NW_013171806.1 | Chr10|NW_013171806.1 | 77 | 265 | Remapped | NW_013171806.1 |
| NW_013171807.1 | Chr10|NW_013171807.1 | 137 | 412 | Remapped | NW_013171807.1 |
| NT_187681.1 | Chr11|NT_187681.1 | 93 | 255 | Remapped | NT_187681.1 |
| NT_187656.1 | Chr11|NT_187656.1 | 34 | 87 | Remapped | NT_187656.1 |
| NT_187657.1 | Chr11|NT_187657.1 | 115 | 317 | Remapped | NT_187657.1 |
| NT_187581.1 | Chr11|NT_187581.1 | 73 | 224 | Remapped | NT_187581.1 |
| NT_187582.1 | Chr11|NT_187582.1 | 27 | 107 | Remapped | NT_187582.1 |
| NT_187583.1 | Chr11|NT_187583.1 | 66 | 215 | Remapped | NT_187583.1 |
| NT_187584.1 | Chr11|NT_187584.1 | 84 | 248 | Remapped | NT_187584.1 |
| NT_187585.1 | Chr11|NT_187585.1 | 124 | 372 | Remapped | NT_187585.1 |
| NT_187586.1 | Chr11|NT_187586.1 | 117 | 313 | Remapped | NT_187586.1 |
| NW_003315936.1 | Chr11|NW_003315936.1 | 54 | 195 | Remapped | NW_003315936.1 |
| NW_003871073.1 | Chr11|NW_003871073.1 | 81 | 240 | Remapped | NW_003871073.1 |
| NW_003871074.1 | Chr11|NW_003871074.1 | 65 | 188 | Remapped | NW_003871074.1 |
| NW_009646203.1 | Chr11|NW_009646203.1 | 94 | 352 | Remapped | NW_009646203.1 |
| NW_011332695.1 | Chr11|NW_011332695.1 | 66 | 215 | Remapped | NW_011332695.1 |
| NW_013171808.1 | Chr11|NW_013171808.1 | 87 | 301 | Remapped | NW_013171808.1 |
| NW_015148966.1 | Chr11|NW_015148966.1 | 70 | 189 | Remapped | NW_015148966.1 |
| NW_017363816.1 | Chr11|NW_017363816.1 | 38 | 147 | Remapped | NW_017363816.1 |
| NW_019805495.1 | Chr11|NW_019805495.1 | 74 | 282 | Remapped | NW_019805495.1 |
| NW_019805496.1 | Chr11|NW_019805496.1 | 257 | 790 | Remapped | NW_019805496.1 |
| NW_019805497.1 | Chr11|NW_019805497.1 | 123 | 408 | Remapped | NW_019805497.1 |
| NW_019805498.1 | Chr11|NW_019805498.1 | 76 | 208 | Remapped | NW_019805498.1 |
| NT_187658.1 | Chr12|NT_187658.1 | 199 | 573 | Remapped | NT_187658.1 |
| NT_187587.1 | Chr12|NT_187587.1 | 101 | 377 | Remapped | NT_187587.1 |
| NT_187588.1 | Chr12|NT_187588.1 | 7 | 28 | Remapped | NT_187588.1 |
| NT_187589.1 | Chr12|NT_187589.1 | 22 | 75 | Remapped | NT_187589.1 |
| NT_187590.1 | Chr12|NT_187590.1 | 68 | 177 | Remapped | NT_187590.1 |
| NT_187591.1 | Chr12|NT_187591.1 | 10 | 34 | Remapped | NT_187591.1 |
| NW_003315938.1 | Chr12|NW_003315938.1 | 36 | 162 | Remapped | NW_003315938.1 |
| NW_003315939.2 | Chr12|NW_003315939.2 | 68 | 250 | Remapped | NW_003315939.2 |
| NW_003315940.1 | Chr12|NW_003315940.1 | 56 | 212 | Remapped | NW_003315940.1 |
| NW_003315941.1 | Chr12|NW_003315941.1 | 60 | 223 | Remapped | NW_003315941.1 |
| NW_003315942.2 | Chr12|NW_003315942.2 | 53 | 150 | Remapped | NW_003315942.2 |
| NW_003571049.1 | Chr12|NW_003571049.1 | 34 | 113 | Remapped | NW_003571049.1 |
| NW_003571050.1 | Chr12|NW_003571050.1 | 133 | 378 | Remapped | NW_003571050.1 |
| NW_009646204.1 | Chr12|NW_009646204.1 | 65 | 210 | Remapped | NW_009646204.1 |
| NW_011332696.1 | Chr12|NW_011332696.1 | 374 | 1,383 | Remapped | NW_011332696.1 |
| NW_011332697.1 | Chr12|NW_011332697.1 | 57 | 176 | Remapped | NW_011332697.1 |
| NW_013171809.1 | Chr12|NW_013171809.1 | 60 | 221 | Remapped | NW_013171809.1 |
| NW_015148967.1 | Chr12|NW_015148967.1 | 145 | 541 | Remapped | NW_015148967.1 |
| NW_018654718.1 | Chr12|NW_018654718.1 | 359 | 1,243 | Remapped | NW_018654718.1 |
| NW_018654719.1 | Chr12|NW_018654719.1 | 65 | 216 | Remapped | NW_018654719.1 |
| NW_018654720.1 | Chr12|NW_018654720.1 | 70 | 261 | Remapped | NW_018654720.1 |
| NW_019805499.1 | Chr12|NW_019805499.1 | 80 | 296 | Remapped | NW_019805499.1 |
| NT_187592.1 | Chr13|NT_187592.1 | 114 | 334 | Remapped | NT_187592.1 |
| NT_187593.1 | Chr13|NT_187593.1 | 85 | 291 | Remapped | NT_187593.1 |
| NT_187594.1 | Chr13|NT_187594.1 | 12 | 45 | Remapped | NT_187594.1 |
| NT_187595.1 | Chr13|NT_187595.1 | 78 | 292 | Remapped | NT_187595.1 |
| NT_187596.1 | Chr13|NT_187596.1 | 18 | 86 | Remapped | NT_187596.1 |
| NT_187597.1 | Chr13|NT_187597.1 | 38 | 215 | Remapped | NT_187597.1 |
| NW_009646205.1 | Chr13|NW_009646205.1 | 17 | 67 | Remapped | NW_009646205.1 |
| NW_011332698.1 | Chr13|NW_011332698.1 | 41 | 97 | Remapped | NW_011332698.1 |
| NW_011332699.1 | Chr13|NW_011332699.1 | 16 | 39 | Remapped | NW_011332699.1 |
| NW_011332700.1 | Chr13|NW_011332700.1 | 52 | 172 | Remapped | NW_011332700.1 |
| NW_013171810.1 | Chr13|NW_013171810.1 | 79 | 290 | Remapped | NW_013171810.1 |
| NW_013171811.1 | Chr13|NW_013171811.1 | 53 | 193 | Remapped | NW_013171811.1 |
| NT_113796.3 | Chr14|NT_113796.3 | 6 | 39 | Remapped | NT_113796.3 |
| NT_187598.1 | Chr14|NT_187598.1 | 188 | 623 | Remapped | NT_187598.1 |
| NT_187599.1 | Chr14|NT_187599.1 | 70 | 223 | Remapped | NT_187599.1 |
| NT_187600.1 | Chr14|NT_187600.1 | 271 | 955 | Remapped | NT_187600.1 |
| NT_187601.1 | Chr14|NT_187601.1 | 709 | 2,160 | Remapped | NT_187601.1 |
| NW_018654721.1 | Chr14|NW_018654721.1 | 165 | 516 | Remapped | NW_018654721.1 |
| NW_018654722.1 | Chr14|NW_018654722.1 | 297 | 1,016 | Remapped | NW_018654722.1 |
| NT_187659.1 | Chr15|NT_187659.1 | 55 | 209 | Remapped | NT_187659.1 |
| NT_187660.1 | Chr15|NT_187660.1 | 1,289 | 4,469 | Remapped | NT_187660.1 |
| NT_187602.1 | Chr15|NT_187602.1 | 7 | 26 | Remapped | NT_187602.1 |
| NT_187603.1 | Chr15|NT_187603.1 | 140 | 512 | Remapped | NT_187603.1 |
| NT_187604.1 | Chr15|NT_187604.1 | 2 | 17 | Remapped | NT_187604.1 |
| NT_187605.1 | Chr15|NT_187605.1 | 105 | 343 | Remapped | NT_187605.1 |
| NT_187606.1 | Chr15|NT_187606.1 | 61 | 202 | Remapped | NT_187606.1 |
| NW_003315943.1 | Chr15|NW_003315943.1 | 8 | 27 | Remapped | NW_003315943.1 |
| NW_003315944.2 | Chr15|NW_003315944.2 | 172 | 553 | Remapped | NW_003315944.2 |
| NW_011332701.1 | Chr15|NW_011332701.1 | 1,342 | 4,712 | Remapped | NW_011332701.1 |
| NW_012132920.1 | Chr15|NW_012132920.1 | 1 | 1 | Remapped | NW_012132920.1 |
| NT_187383.1 | Chr16|NT_187383.1 | 1 | 3 | Remapped | NT_187383.1 |
| NT_187607.1 | Chr16|NT_187607.1 | 1,048 | 3,402 | Remapped | NT_187607.1 |
| NT_187608.1 | Chr16|NT_187608.1 | 121 | 338 | Remapped | NT_187608.1 |
| NT_187609.1 | Chr16|NT_187609.1 | 34 | 100 | Remapped | NT_187609.1 |
| NT_187610.1 | Chr16|NT_187610.1 | 83 | 240 | Remapped | NT_187610.1 |
| NW_003315945.1 | Chr16|NW_003315945.1 | 52 | 170 | Remapped | NW_003315945.1 |
| NW_003315946.1 | Chr16|NW_003315946.1 | 84 | 292 | Remapped | NW_003315946.1 |
| NW_012132921.1 | Chr16|NW_012132921.1 | 68 | 253 | Remapped | NW_012132921.1 |
| NW_013171812.1 | Chr16|NW_013171812.1 | 32 | 91 | Remapped | NW_013171812.1 |
| NW_013171813.1 | Chr16|NW_013171813.1 | 125 | 372 | Remapped | NW_013171813.1 |
| NW_017852933.1 | Chr16|NW_017852933.1 | 606 | 1,877 | Remapped | NW_017852933.1 |
| NW_018654723.1 | Chr16|NW_018654723.1 | 40 | 150 | Remapped | NW_018654723.1 |
| NW_019805500.1 | Chr16|NW_019805500.1 | 255 | 870 | Remapped | NW_019805500.1 |
| NT_187661.1 | Chr17|NT_187661.1 | 48 | 159 | Remapped | NT_187661.1 |
| NT_187662.1 | Chr17|NT_187662.1 | 62 | 166 | Remapped | NT_187662.1 |
| NT_187663.1 | Chr17|NT_187663.1 | 506 | 1,670 | Remapped | NT_187663.1 |
| NT_187664.1 | Chr17|NT_187664.1 | 74 | 271 | Remapped | NT_187664.1 |
| NW_003871093.1 | Chr17|NW_003871093.1 | 30 | 109 | Remapped | NW_003871093.1 |
| NT_167251.2 | Chr17|NT_167251.2 | 52 | 146 | Remapped | NT_167251.2 |
| NT_187611.1 | Chr17|NT_187611.1 | 142 | 483 | Remapped | NT_187611.1 |
| NT_187612.1 | Chr17|NT_187612.1 | 47 | 172 | Remapped | NT_187612.1 |
| NT_187613.1 | Chr17|NT_187613.1 | 272 | 979 | Remapped | NT_187613.1 |
| NT_187614.1 | Chr17|NT_187614.1 | 1,646 | 5,302 | Remapped | NT_187614.1 |
| NT_187615.1 | Chr17|NT_187615.1 | 111 | 341 | Remapped | NT_187615.1 |
| NT_187616.1 | Chr17|NT_187616.1 | 62 | 211 | Remapped | NT_187616.1 |
| NW_003315952.3 | Chr17|NW_003315952.3 | 103 | 303 | Remapped | NW_003315952.3 |
| NW_003315953.2 | Chr17|NW_003315953.2 | 57 | 146 | Remapped | NW_003315953.2 |
| NW_003315954.1 | Chr17|NW_003315954.1 | 88 | 332 | Remapped | NW_003315954.1 |
| NW_003315955.1 | Chr17|NW_003315955.1 | 65 | 210 | Remapped | NW_003315955.1 |
| NW_003871091.1 | Chr17|NW_003871091.1 | 124 | 486 | Remapped | NW_003871091.1 |
| NW_003871092.1 | Chr17|NW_003871092.1 | 24 | 89 | Remapped | NW_003871092.1 |
| NW_016107299.1 | Chr17|NW_016107299.1 | 105 | 347 | Remapped | NW_016107299.1 |
| NW_017363817.1 | Chr17|NW_017363817.1 | 158 | 529 | Remapped | NW_017363817.1 |
| NW_017363818.1 | Chr17|NW_017363818.1 | 102 | 367 | Remapped | NW_017363818.1 |
| NW_017363819.1 | Chr17|NW_017363819.1 | 99 | 285 | Remapped | NW_017363819.1 |
| NW_019805501.1 | Chr17|NW_019805501.1 | 62 | 211 | Remapped | NW_019805501.1 |
| NT_187665.1 | Chr18|NT_187665.1 | 60 | 181 | Remapped | NT_187665.1 |
| NT_187666.1 | Chr18|NT_187666.1 | 74 | 213 | Remapped | NT_187666.1 |
| NT_187617.1 | Chr18|NT_187617.1 | 54 | 158 | Remapped | NT_187617.1 |
| NT_187618.1 | Chr18|NT_187618.1 | 47 | 182 | Remapped | NT_187618.1 |
| NW_003315956.1 | Chr18|NW_003315956.1 | 102 | 336 | Remapped | NW_003315956.1 |
| NW_003315957.1 | Chr18|NW_003315957.1 | 38 | 149 | Remapped | NW_003315957.1 |
| NW_003315958.1 | Chr18|NW_003315958.1 | 56 | 171 | Remapped | NW_003315958.1 |
| NW_003315959.1 | Chr18|NW_003315959.1 | 53 | 167 | Remapped | NW_003315959.1 |
| NW_003315960.1 | Chr18|NW_003315960.1 | 55 | 165 | Remapped | NW_003315960.1 |
| NW_003315961.1 | Chr18|NW_003315961.1 | 74 | 213 | Remapped | NW_003315961.1 |
| NW_013171814.1 | Chr18|NW_013171814.1 | 141 | 449 | Remapped | NW_013171814.1 |
| NW_014040928.1 | Chr18|NW_014040928.1 | 72 | 266 | Remapped | NW_014040928.1 |
| NW_018654724.1 | Chr18|NW_018654724.1 | 32 | 129 | Remapped | NW_018654724.1 |
| NW_019805502.1 | Chr18|NW_019805502.1 | 83 | 274 | Remapped | NW_019805502.1 |
| NW_019805503.1 | Chr18|NW_019805503.1 | 46 | 217 | Remapped | NW_019805503.1 |
| NT_187693.1 | Chr19|NT_187693.1 | 707 | 2,481 | Remapped | NT_187693.1 |
| NW_003571061.2 | Chr19|NW_003571061.2 | 454 | 1,600 | Remapped | NW_003571061.2 |
| NW_003571057.2 | Chr19|NW_003571057.2 | 327 | 1,124 | Remapped | NW_003571057.2 |
| NW_003571058.2 | Chr19|NW_003571058.2 | 327 | 1,124 | Remapped | NW_003571058.2 |
| NW_003571059.2 | Chr19|NW_003571059.2 | 327 | 1,124 | Remapped | NW_003571059.2 |
| NW_003571060.1 | Chr19|NW_003571060.1 | 591 | 2,092 | Remapped | NW_003571060.1 |
| NW_003571056.2 | Chr19|NW_003571056.2 | 327 | 1,124 | Remapped | NW_003571056.2 |
| NW_003571055.2 | Chr19|NW_003571055.2 | 419 | 1,475 | Remapped | NW_003571055.2 |
| NT_187619.1 | Chr19|NT_187619.1 | 28 | 80 | Remapped | NT_187619.1 |
| NT_187620.1 | Chr19|NT_187620.1 | 68 | 226 | Remapped | NT_187620.1 |
| NT_187621.1 | Chr19|NT_187621.1 | 26 | 57 | Remapped | NT_187621.1 |
| NT_187622.1 | Chr19|NT_187622.1 | 48 | 197 | Remapped | NT_187622.1 |
| NW_003315962.1 | Chr19|NW_003315962.1 | 194 | 768 | Remapped | NW_003315962.1 |
| NW_003315963.1 | Chr19|NW_003315963.1 | 130 | 404 | Remapped | NW_003315963.1 |
| NW_003315964.2 | Chr19|NW_003315964.2 | 92 | 321 | Remapped | NW_003315964.2 |
| NW_003315965.1 | Chr19|NW_003315965.1 | 98 | 325 | Remapped | NW_003315965.1 |
| NW_003571054.1 | Chr19|NW_003571054.1 | 571 | 2,023 | Remapped | NW_003571054.1 |
| NW_009646206.1 | Chr19|NW_009646206.1 | 199 | 758 | Remapped | NW_009646206.1 |
| NW_014040929.1 | Chr19|NW_014040929.1 | 315 | 1,053 | Remapped | NW_014040929.1 |
| NT_187623.1 | Chr20|NT_187623.1 | 36 | 105 | Remapped | NT_187623.1 |
| NT_187624.1 | Chr20|NT_187624.1 | 47 | 119 | Remapped | NT_187624.1 |
| NT_187625.1 | Chr20|NT_187625.1 | 19 | 47 | Remapped | NT_187625.1 |
| NW_003315966.2 | Chr20|NW_003315966.2 | 57 | 198 | Remapped | NW_003315966.2 |
| NT_187626.1 | Chr21|NT_187626.1 | 30 | 112 | Remapped | NT_187626.1 |
| NT_187627.1 | Chr21|NT_187627.1 | 68 | 214 | Remapped | NT_187627.1 |
| NT_187628.1 | Chr21|NT_187628.1 | 56 | 179 | Remapped | NT_187628.1 |
| NW_003315967.2 | Chr21|NW_003315967.2 | 17 | 66 | Remapped | NW_003315967.2 |
| NW_003315968.2 | Chr21|NW_003315968.2 | 80 | 223 | Remapped | NW_003315968.2 |
| NW_003315969.2 | Chr21|NW_003315969.2 | 43 | 104 | Remapped | NW_003315969.2 |
| NW_003315970.2 | Chr21|NW_003315970.2 | 93 | 309 | Remapped | NW_003315970.2 |
| NT_187682.1 | Chr22|NT_187682.1 | 12 | 55 | Remapped | NT_187682.1 |
| NW_004504305.1 | Chr22|NW_004504305.1 | 7 | 37 | Remapped | NW_004504305.1 |
| NW_009646207.1 | Chr22|NW_009646207.1 | 5 | 31 | Remapped | NW_009646207.1 |
| NW_015148969.1 | Chr22|NW_015148969.1 | 26 | 87 | Remapped | NW_015148969.1 |
| NT_187629.1 | Chr22|NT_187629.1 | 112 | 380 | Remapped | NT_187629.1 |
| NT_187630.1 | Chr22|NT_187630.1 | 161 | 521 | Remapped | NT_187630.1 |
| NT_187631.1 | Chr22|NT_187631.1 | 50 | 156 | Remapped | NT_187631.1 |
| NT_187632.1 | Chr22|NT_187632.1 | 69 | 174 | Remapped | NT_187632.1 |
| NT_187633.1 | Chr22|NT_187633.1 | 97 | 335 | Remapped | NT_187633.1 |
| NW_003315971.2 | Chr22|NW_003315971.2 | 7 | 37 | Remapped | NW_003315971.2 |
| NW_003315972.2 | Chr22|NW_003315972.2 | 70 | 204 | Remapped | NW_003315972.2 |
| NT_187667.1 | ChrX|NT_187667.1 | 1 | 5 | Remapped | NT_187667.1 |
| NW_017363820.1 | ChrX|NW_017363820.1 | 94 | 255 | Remapped | NW_017363820.1 |
| NT_187634.1 | ChrX|NT_187634.1 | 1 | 5 | Remapped | NT_187634.1 |
| NT_187635.1 | ChrX|NT_187635.1 | 35 | 122 | Remapped | NT_187635.1 |
| NW_009646209.1 | ChrY|NW_009646209.1 | 22 | 175 | Remapped | NW_009646209.1 |
| NW_018654725.1 | ChrY|NW_018654725.1 | 4 | 19 | Remapped | NW_018654725.1 |
| NW_018654726.1 | ChrY|NW_018654726.1 | 41 | 94 | Remapped | NW_018654726.1 |
| Sequence ID | Chr | Number of Variant Regions | Number of Variant Calls | Placement type | Link to graphical display |
|---|---|---|---|---|---|
| NC_000001.10 | Chr1 | 108,511 | 354,889 | Submitted | NC_000001.10 |
| NC_000002.11 | Chr2 | 107,072 | 354,243 | Submitted | NC_000002.11 |
| NC_000003.11 | Chr3 | 88,603 | 296,161 | Submitted | NC_000003.11 |
| NC_000004.11 | Chr4 | 82,083 | 274,199 | Submitted | NC_000004.11 |
| NC_000005.9 | Chr5 | 78,035 | 261,419 | Submitted | NC_000005.9 |
| NC_000006.11 | Chr6 | 76,846 | 259,298 | Submitted | NC_000006.11 |
| NC_000007.13 | Chr7 | 71,883 | 240,738 | Submitted | NC_000007.13 |
| NC_000008.10 | Chr8 | 64,660 | 213,670 | Submitted | NC_000008.10 |
| NC_000009.11 | Chr9 | 52,284 | 174,947 | Submitted | NC_000009.11 |
| NC_000010.10 | Chr10 | 61,724 | 206,329 | Submitted | NC_000010.10 |
| NC_000011.9 | Chr11 | 58,770 | 194,279 | Submitted | NC_000011.9 |
| NC_000012.11 | Chr12 | 65,869 | 216,801 | Submitted | NC_000012.11 |
| NC_000013.10 | Chr13 | 42,531 | 144,471 | Submitted | NC_000013.10 |
| NC_000014.8 | Chr14 | 42,189 | 141,771 | Submitted | NC_000014.8 |
| NC_000015.9 | Chr15 | 38,463 | 129,979 | Submitted | NC_000015.9 |
| NC_000016.9 | Chr16 | 41,661 | 135,775 | Submitted | NC_000016.9 |
| NC_000017.10 | Chr17 | 45,392 | 149,557 | Submitted | NC_000017.10 |
| NC_000018.9 | Chr18 | 33,627 | 113,725 | Submitted | NC_000018.9 |
| NC_000019.9 | Chr19 | 39,285 | 128,388 | Submitted | NC_000019.9 |
| NC_000020.10 | Chr20 | 30,109 | 97,913 | Submitted | NC_000020.10 |
| NC_000021.8 | Chr21 | 15,687 | 54,527 | Submitted | NC_000021.8 |
| NC_000022.10 | Chr22 | 18,592 | 61,231 | Submitted | NC_000022.10 |
| NC_000023.10 | ChrX | 59,427 | 179,089 | Submitted | NC_000023.10 |
| NC_000024.9 | ChrY | 5,218 | 11,229 | Submitted | NC_000024.9 |
| Variant Region remap status | Variant Call remap status | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence ID | Chr | Variant Regions on source | Perfect | Good | Pass | Fail | Mult | Variant Calls on source | Perfect | Good | Pass | Fail | Mult |
| NC_000001.10 | Chr1 | 108,511 | 105,490 | 39 | 351 | 2 | 2,629 | 354,889 | 344,307 | 221 | 1,747 | 7 | 8,607 |
| NC_000002.11 | Chr2 | 107,072 | 105,616 | 2 | 33 | 11 | 1,410 | 354,243 | 349,247 | 4 | 189 | 59 | 4,744 |
| NC_000003.11 | Chr3 | 88,603 | 86,640 | 3 | 34 | 0 | 1,926 | 296,161 | 289,430 | 14 | 209 | 0 | 6,508 |
| NC_000004.11 | Chr4 | 82,083 | 80,998 | 4 | 17 | 0 | 1,064 | 274,199 | 270,648 | 20 | 119 | 0 | 3,412 |
| NC_000005.9 | Chr5 | 78,035 | 76,467 | 1 | 5 | 0 | 1,562 | 261,419 | 256,372 | 7 | 28 | 0 | 5,012 |
| NC_000006.11 | Chr6 | 76,846 | 75,421 | 6 | 45 | 1 | 1,373 | 259,298 | 254,670 | 32 | 259 | 2 | 4,335 |
| NC_000007.13 | Chr7 | 71,883 | 70,265 | 16 | 77 | 10 | 1,515 | 240,738 | 235,178 | 85 | 438 | 44 | 4,993 |
| NC_000008.10 | Chr8 | 64,660 | 60,620 | 3 | 19 | 0 | 4,018 | 213,670 | 200,172 | 19 | 112 | 0 | 13,367 |
| NC_000009.11 | Chr9 | 52,284 | 51,654 | 1 | 14 | 1 | 614 | 174,947 | 172,763 | 1 | 85 | 4 | 2,094 |
| NC_000010.10 | Chr10 | 61,724 | 61,049 | 3 | 21 | 0 | 651 | 206,329 | 204,009 | 22 | 157 | 0 | 2,141 |
| NC_000011.9 | Chr11 | 58,770 | 57,191 | 2 | 9 | 0 | 1,568 | 194,279 | 189,300 | 13 | 45 | 0 | 4,921 |
| NC_000012.11 | Chr12 | 65,869 | 63,878 | 1 | 0 | 0 | 1,990 | 216,801 | 209,883 | 2 | 0 | 0 | 6,916 |
| NC_000013.10 | Chr13 | 42,531 | 41,948 | 0 | 1 | 1 | 581 | 144,471 | 142,395 | 0 | 5 | 5 | 2,066 |
| NC_000014.8 | Chr14 | 42,189 | 40,403 | 13 | 69 | 4 | 1,700 | 141,771 | 135,759 | 75 | 414 | 30 | 5,493 |
| NC_000015.9 | Chr15 | 38,463 | 36,623 | 2 | 8 | 0 | 1,830 | 129,979 | 123,526 | 11 | 76 | 0 | 6,366 |
| NC_000016.9 | Chr16 | 41,661 | 39,114 | 0 | 0 | 0 | 2,547 | 135,775 | 127,627 | 0 | 0 | 0 | 8,148 |
| NC_000017.10 | Chr17 | 45,392 | 41,661 | 4 | 25 | 0 | 3,702 | 149,557 | 137,149 | 34 | 172 | 0 | 12,202 |
| NC_000018.9 | Chr18 | 33,627 | 32,762 | 1 | 7 | 0 | 857 | 113,725 | 110,776 | 11 | 52 | 0 | 2,886 |
| NC_000019.9 | Chr19 | 39,285 | 37,380 | 13 | 60 | 0 | 1,832 | 128,388 | 121,523 | 78 | 336 | 0 | 6,451 |
| NC_000020.10 | Chr20 | 30,109 | 29,927 | 3 | 20 | 0 | 159 | 97,913 | 97,306 | 20 | 118 | 0 | 469 |
| NC_000021.8 | Chr21 | 15,687 | 15,284 | 0 | 6 | 0 | 397 | 54,527 | 53,278 | 0 | 21 | 0 | 1,228 |
| NC_000022.10 | Chr22 | 18,592 | 17,939 | 10 | 58 | 1 | 584 | 61,231 | 58,901 | 86 | 364 | 15 | 1,865 |
| NC_000023.10 | ChrX | 59,427 | 58,902 | 44 | 345 | 5 | 131 | 179,089 | 176,522 | 280 | 1,890 | 14 | 383 |
| NC_000024.9 | ChrY | 5,218 | 5,144 | 1 | 7 | 0 | 66 | 11,229 | 10,915 | 6 | 30 | 0 | 278 |
Samplesets
Number of Samplesets: 1
- Size:
- 280
- Organisms:
- Homo sapiens
- Sampleset Phenotype(s):
- None reported
| Sample ID | Subject ID | Subject Phenotype |
|---|---|---|
| LP6005441-DNA_D12 | LP6005441-DNA_D12 | Not reported |
| LP6005441-DNA_G10 | LP6005441-DNA_G10 | Not reported |
| LP6005441-DNA_F02 | LP6005441-DNA_F02 | Not reported |
| LP6005441-DNA_H12 | LP6005441-DNA_H12 | Not reported |
| LP6005441-DNA_D08 | LP6005441-DNA_D08 | Not reported |
| LP6005441-DNA_H08 | LP6005441-DNA_H08 | Not reported |
| LP6005441-DNA_C03 | LP6005441-DNA_C03 | Not reported |
| LP6005441-DNA_E08 | LP6005441-DNA_E08 | Not reported |
| LP6005441-DNA_B12 | LP6005441-DNA_B12 | Not reported |
| LP6005441-DNA_B04 | LP6005441-DNA_B04 | Not reported |
| LP6005442-DNA_C02 | LP6005442-DNA_C02 | Not reported |
| LP6005441-DNA_G08 | LP6005441-DNA_G08 | Not reported |
| LP6005442-DNA_A08 | LP6005442-DNA_A08 | Not reported |
| LP6005441-DNA_A08 | LP6005441-DNA_A08 | Not reported |
| LP6005442-DNA_A11 | LP6005442-DNA_A11 | Not reported |
| LP6005441-DNA_H02 | LP6005441-DNA_H02 | Not reported |
| LP6005441-DNA_B11 | LP6005441-DNA_B11 | Not reported |
| LP6005441-DNA_G05 | LP6005441-DNA_G05 | Not reported |
| LP6005442-DNA_B12 | LP6005442-DNA_B12 | Not reported |
| LP6005441-DNA_H03 | LP6005441-DNA_H03 | Not reported |
| LP6005441-DNA_E06 | LP6005441-DNA_E06 | Not reported |
| LP6005441-DNA_H09 | LP6005441-DNA_H09 | Not reported |
| LP6005441-DNA_A01 | LP6005441-DNA_A01 | Not reported |
| LP6005441-DNA_D02 | LP6005441-DNA_D02 | Not reported |
| LP6005441-DNA_C10 | LP6005441-DNA_C10 | Not reported |
| LP6005442-DNA_B02 | LP6005442-DNA_B02 | Not reported |
| LP6005441-DNA_A06 | LP6005441-DNA_A06 | Not reported |
| LP6005441-DNA_G11 | LP6005441-DNA_G11 | Not reported |
| LP6005441-DNA_E07 | LP6005441-DNA_E07 | Not reported |
| LP6005441-DNA_F12 | LP6005441-DNA_F12 | Not reported |
| LP6005441-DNA_F01 | LP6005441-DNA_F01 | Not reported |
| LP6005441-DNA_E02 | LP6005441-DNA_E02 | Not reported |
| LP6005441-DNA_B09 | LP6005441-DNA_B09 | Not reported |
| LP6005441-DNA_D04 | LP6005441-DNA_D04 | Not reported |
| LP6005441-DNA_F10 | LP6005441-DNA_F10 | Not reported |
| LP6005441-DNA_C01 | LP6005441-DNA_C01 | Not reported |
| LP6005441-DNA_G03 | LP6005441-DNA_G03 | Not reported |
| LP6005441-DNA_F05 | LP6005441-DNA_F05 | Not reported |
| LP6005442-DNA_A02 | LP6005442-DNA_A02 | Not reported |
| LP6005441-DNA_B03 | LP6005441-DNA_B03 | Not reported |
| LP6005442-DNA_B03 | LP6005442-DNA_B03 | Not reported |
| LP6005441-DNA_D07 | LP6005441-DNA_D07 | Not reported |
| LP6005441-DNA_G07 | LP6005441-DNA_G07 | Not reported |
| LP6005441-DNA_F08 | LP6005441-DNA_F08 | Not reported |
| LP6005441-DNA_C09 | LP6005441-DNA_C09 | Not reported |
| LP6005441-DNA_E05 | LP6005441-DNA_E05 | Not reported |
| LP6005441-DNA_G09 | LP6005441-DNA_G09 | Not reported |
| LP6005441-DNA_F07 | LP6005441-DNA_F07 | Not reported |
| LP6005441-DNA_A03 | LP6005441-DNA_A03 | Not reported |
| LP6005441-DNA_G12 | LP6005441-DNA_G12 | Not reported |
| LP6005441-DNA_G06 | LP6005441-DNA_G06 | Not reported |
| LP6005441-DNA_C02 | LP6005441-DNA_C02 | Not reported |
| LP6005441-DNA_H10 | LP6005441-DNA_H10 | Not reported |
| LP6005441-DNA_H07 | LP6005441-DNA_H07 | Not reported |
| LP6005442-DNA_B11 | LP6005442-DNA_B11 | Not reported |
| LP6005442-DNA_B01 | LP6005442-DNA_B01 | Not reported |
| LP6005441-DNA_G04 | LP6005441-DNA_G04 | Not reported |
| LP6005441-DNA_H06 | LP6005441-DNA_H06 | Not reported |
| LP6005441-DNA_F03 | LP6005441-DNA_F03 | Not reported |
| LP6005442-DNA_B10 | LP6005442-DNA_B10 | Not reported |
| LP6005441-DNA_C11 | LP6005441-DNA_C11 | Not reported |
| LP6005441-DNA_D03 | LP6005441-DNA_D03 | Not reported |
| LP6005441-DNA_G02 | LP6005441-DNA_G02 | Not reported |
| LP6005441-DNA_H05 | LP6005441-DNA_H05 | Not reported |
| LP6005441-DNA_A05 | LP6005441-DNA_A05 | Not reported |
| LP6005441-DNA_B07 | LP6005441-DNA_B07 | Not reported |
| LP6005441-DNA_B10 | LP6005441-DNA_B10 | Not reported |
| LP6005441-DNA_B01 | LP6005441-DNA_B01 | Not reported |
| LP6005441-DNA_F06 | LP6005441-DNA_F06 | Not reported |
| LP6005441-DNA_E09 | LP6005441-DNA_E09 | Not reported |
| LP6005441-DNA_B08 | LP6005441-DNA_B08 | Not reported |
| LP6005441-DNA_D11 | LP6005441-DNA_D11 | Not reported |
| LP6005441-DNA_A12 | LP6005441-DNA_A12 | Not reported |
| LP6005441-DNA_F04 | LP6005441-DNA_F04 | Not reported |
| LP6005441-DNA_E03 | LP6005441-DNA_E03 | Not reported |
| LP6005441-DNA_D09 | LP6005441-DNA_D09 | Not reported |
| LP6005441-DNA_D10 | LP6005441-DNA_D10 | Not reported |
| LP6005441-DNA_E10 | LP6005441-DNA_E10 | Not reported |
| LP6005441-DNA_C05 | LP6005441-DNA_C05 | Not reported |
| LP6005442-DNA_B08 | LP6005442-DNA_B08 | Not reported |
| LP6005441-DNA_C06 | LP6005441-DNA_C06 | Not reported |
| LP6005441-DNA_B05 | LP6005441-DNA_B05 | Not reported |
| LP6005441-DNA_D06 | LP6005441-DNA_D06 | Not reported |
| LP6005441-DNA_H11 | LP6005441-DNA_H11 | Not reported |
| LP6005441-DNA_C08 | LP6005441-DNA_C08 | Not reported |
| LP6005441-DNA_D05 | LP6005441-DNA_D05 | Not reported |
| LP6005441-DNA_B06 | LP6005441-DNA_B06 | Not reported |
| LP6005442-DNA_A10 | LP6005442-DNA_A10 | Not reported |
| LP6005442-DNA_A04 | LP6005442-DNA_A04 | Not reported |
| LP6005441-DNA_F09 | LP6005441-DNA_F09 | Not reported |
| LP6005441-DNA_D01 | LP6005441-DNA_D01 | Not reported |
| LP6005441-DNA_C07 | LP6005441-DNA_C07 | Not reported |
| LP6005441-DNA_A10 | LP6005441-DNA_A10 | Not reported |
| LP6005442-DNA_B04 | LP6005442-DNA_B04 | Not reported |
| LP6005442-DNA_A12 | LP6005442-DNA_A12 | Not reported |
| LP6005442-DNA_A03 | LP6005442-DNA_A03 | Not reported |
| LP6005441-DNA_B02 | LP6005441-DNA_B02 | Not reported |
| LP6005441-DNA_A11 | LP6005441-DNA_A11 | Not reported |
| LP6005441-DNA_A04 | LP6005441-DNA_A04 | Not reported |
| LP6005441-DNA_A09 | LP6005441-DNA_A09 | Not reported |
Experimental Details
| Experiment ID | Type | Method | Analysis | Platforms | Number of Variant Calls |
|---|---|---|---|---|---|
| 1 | Discovery | Sequencing | Genotyping | Illumina | 4,394,628 |