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nstd20 (McCarroll et al. 2006)

Organism:
Human
Study Type:
Control Set
Submitter:
Steven McCarroll
Description:
We developed a systematic approach for identifying deletions from patterns of Mendel failures, null genotypes and Hardy-Weinberg disequilibrium in dense genotype data. See Variant Summary counts for nstd20 in dbVar Variant Summary.
Publication(s):
McCarroll et al. 2006

Detailed Information: Download 539 Variant Regions, Download 3905 Variant Calls, Download Both, FTP

Variant Summary

Assembly used for analysis:
Remapped: GRCh38.p12 (hg38)
Remapped: GRCh37.p13 (hg19)
Submitted: NCBI34 (hg16)

Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.11Chr137309RemappedNC_000001.11
NC_000002.12Chr250307RemappedNC_000002.12
NC_000003.12Chr356702RemappedNC_000003.12
NC_000004.12Chr439474RemappedNC_000004.12
NC_000005.10Chr548RemappedNC_000005.10
NC_000006.12Chr618152RemappedNC_000006.12
NC_000007.14Chr729304RemappedNC_000007.14
NC_000008.11Chr862403RemappedNC_000008.11
NC_000009.12Chr93171RemappedNC_000009.12
NC_000010.11Chr101774RemappedNC_000010.11
NC_000011.10Chr11516RemappedNC_000011.10
NC_000012.12Chr1254222RemappedNC_000012.12
NC_000013.11Chr131034RemappedNC_000013.11
NC_000014.9Chr14625RemappedNC_000014.9
NC_000015.10Chr15516RemappedNC_000015.10
NC_000017.11Chr17317RemappedNC_000017.11
NC_000018.10Chr182554RemappedNC_000018.10
NC_000019.10Chr1912RemappedNC_000019.10
NC_000020.11Chr20725RemappedNC_000020.11
NC_000021.9Chr211126RemappedNC_000021.9
NC_000022.11Chr2222134RemappedNC_000022.11
NC_000023.11ChrX4099RemappedNC_000023.11
NW_018654707.1Chr1|NW_018654707.1151RemappedNW_018654707.1
NT_187523.1Chr2|NT_187523.111RemappedNT_187523.1
NT_187647.1Chr2|NT_187647.111RemappedNT_187647.1
NW_012132915.1Chr2|NW_012132915.1115RemappedNW_012132915.1
NW_019805488.1Chr3|NW_019805488.111RemappedNW_019805488.1
NW_019805489.1Chr3|NW_019805489.112RemappedNW_019805489.1
NW_003315915.1Chr4|NW_003315915.1123RemappedNW_003315915.1
NW_003315919.1Chr5|NW_003315919.112RemappedNW_003315919.1
NT_167246.2Chr6|NT_167246.2524RemappedNT_167246.2
NT_167247.2Chr6|NT_167247.2524RemappedNT_167247.2
NT_167248.2Chr6|NT_167248.2526RemappedNT_167248.2
NT_167249.2Chr6|NT_167249.2524RemappedNT_167249.2
NT_167245.2Chr6|NT_167245.2317RemappedNT_167245.2
NT_113891.3Chr6|NT_113891.3526RemappedNT_113891.3
NT_167244.2Chr6|NT_167244.229RemappedNT_167244.2
NW_018654713.1Chr6|NW_018654713.112RemappedNW_018654713.1
NT_187558.1Chr7|NT_187558.117RemappedNT_187558.1
NT_187561.1Chr7|NT_187561.122RemappedNT_187561.1
NT_187562.1Chr7|NT_187562.15337RemappedNT_187562.1
NT_187653.1Chr7|NT_187653.117RemappedNT_187653.1
NT_187570.1Chr8|NT_187570.1214RemappedNT_187570.1
NT_187576.1Chr8|NT_187576.1218RemappedNT_187576.1
NW_018654717.1Chr8|NW_018654717.1316RemappedNW_018654717.1
NW_013171806.1Chr10|NW_013171806.113RemappedNW_013171806.1
NW_003315936.1Chr11|NW_003315936.112RemappedNW_003315936.1
NW_019805495.1Chr11|NW_019805495.112RemappedNW_019805495.1
NT_187658.1Chr12|NT_187658.1117RemappedNT_187658.1
NW_003315942.2Chr12|NW_003315942.216RemappedNW_003315942.2
NW_018654718.1Chr12|NW_018654718.111RemappedNW_018654718.1
NW_019805499.1Chr12|NW_019805499.112RemappedNW_019805499.1
NW_011332698.1Chr13|NW_011332698.114RemappedNW_011332698.1
NT_187600.1Chr14|NT_187600.1215RemappedNT_187600.1
NW_003315953.2Chr17|NW_003315953.212RemappedNW_003315953.2
NT_187665.1Chr18|NT_187665.112RemappedNT_187665.1
NT_187666.1Chr18|NT_187666.111RemappedNT_187666.1
NW_003315956.1Chr18|NW_003315956.112RemappedNW_003315956.1
NW_003315958.1Chr18|NW_003315958.112RemappedNW_003315958.1
NW_003315961.1Chr18|NW_003315961.111RemappedNW_003315961.1
NW_013171814.1Chr18|NW_013171814.112RemappedNW_013171814.1
NT_187629.1Chr22|NT_187629.1052RemappedNT_187629.1
NT_187633.1Chr22|NT_187633.1115RemappedNT_187633.1
Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.10Chr136307RemappedNC_000001.10
NC_000002.11Chr250307RemappedNC_000002.11
NC_000003.11Chr356702RemappedNC_000003.11
NC_000004.11Chr439474RemappedNC_000004.11
NC_000005.9Chr548RemappedNC_000005.9
NC_000006.11Chr618152RemappedNC_000006.11
NC_000007.13Chr729357RemappedNC_000007.13
NC_000008.10Chr863418RemappedNC_000008.10
NC_000009.11Chr93069RemappedNC_000009.11
NC_000010.10Chr101774RemappedNC_000010.10
NC_000011.9Chr11516RemappedNC_000011.9
NC_000012.11Chr1254222RemappedNC_000012.11
NC_000013.10Chr131034RemappedNC_000013.10
NC_000014.8Chr14625RemappedNC_000014.8
NC_000015.9Chr15516RemappedNC_000015.9
NC_000017.10Chr17317RemappedNC_000017.10
NC_000018.9Chr182554RemappedNC_000018.9
NC_000019.9Chr1912RemappedNC_000019.9
NC_000020.10Chr20725RemappedNC_000020.10
NC_000021.8Chr211126RemappedNC_000021.8
NC_000022.10Chr2223149RemappedNC_000022.10
NC_000023.10ChrX4099RemappedNC_000023.10
NW_003871055.3Chr1|NW_003871055.324RemappedNW_003871055.3
NW_003871058.1Chr3|NW_003871058.118RemappedNW_003871058.1
NW_003315915.1Chr4|NW_003315915.1123RemappedNW_003315915.1
NW_003315919.1Chr5|NW_003315919.112RemappedNW_003315919.1
NW_004775428.1Chr5|NW_004775428.112RemappedNW_004775428.1
NT_113891.2Chr6|NT_113891.2526RemappedNT_113891.2
NT_167244.1Chr6|NT_167244.129RemappedNT_167244.1
NT_167245.1Chr6|NT_167245.1317RemappedNT_167245.1
NT_167246.1Chr6|NT_167246.1423RemappedNT_167246.1
NT_167247.1Chr6|NT_167247.1423RemappedNT_167247.1
NT_167248.1Chr6|NT_167248.1425RemappedNT_167248.1
NT_167249.1Chr6|NT_167249.1423RemappedNT_167249.1
NW_003871063.1Chr6|NW_003871063.129RemappedNW_003871063.1
NW_003571040.1Chr7|NW_003571040.15337RemappedNW_003571040.1
NW_003571042.1Chr8|NW_003571042.1218RemappedNW_003571042.1
NW_003871068.1Chr10|NW_003871068.136RemappedNW_003871068.1
NW_003315936.1Chr11|NW_003315936.112RemappedNW_003315936.1
NW_003315942.2Chr12|NW_003315942.216RemappedNW_003315942.2
NW_004166863.1Chr14|NW_004166863.1112RemappedNW_004166863.1
NW_003315953.1Chr17|NW_003315953.112RemappedNW_003315953.1
NW_004166864.2Chr17|NW_004166864.2112RemappedNW_004166864.2
NW_003315956.1Chr18|NW_003315956.112RemappedNW_003315956.1
NW_003315958.1Chr18|NW_003315958.112RemappedNW_003315958.1
NW_003315961.1Chr18|NW_003315961.111RemappedNW_003315961.1
NW_003871100.1ChrX|NW_003871100.111RemappedNW_003871100.1
NW_003871103.3ChrX|NW_003871103.311RemappedNW_003871103.3
NW_004070880.2ChrX|NW_004070880.211RemappedNW_004070880.2
NW_004070890.2ChrX|NW_004070890.2410RemappedNW_004070890.2
NW_004070892.1ChrX|NW_004070892.112RemappedNW_004070892.1
Sequence IDChrNumber of Variant RegionsNumber of Variant CallsPlacement typeLink to graphical display
NC_000001.7Chr137309SubmittedNC_000001.7
GPC_000000200.1Chr250307SubmittedGPC_000000200.1
NC_000003.8Chr356702SubmittedNC_000003.8
NC_000004.8Chr440547SubmittedNC_000004.8
NC_000005.7Chr548SubmittedNC_000005.7
NC_000006.8Chr619155SubmittedNC_000006.8
NC_000007.10Chr732629SubmittedNC_000007.10
NC_000008.8Chr863418SubmittedNC_000008.8
GPC_000000201.1Chr93171SubmittedGPC_000000201.1
NC_000010.7Chr101774SubmittedNC_000010.7
NC_000011.7Chr11516SubmittedNC_000011.7
NC_000012.8Chr1254222SubmittedNC_000012.8
NC_000013.8Chr131034SubmittedNC_000013.8
NC_000014.6Chr14625SubmittedNC_000014.6
NC_000015.7Chr15516SubmittedNC_000015.7
NC_000017.8Chr17317SubmittedNC_000017.8
NC_000018.7Chr182554SubmittedNC_000018.7
NC_000019.8Chr1912SubmittedNC_000019.8
NC_000020.8Chr20725SubmittedNC_000020.8
NC_000021.6Chr211126SubmittedNC_000021.6
NC_000022.7Chr2223149SubmittedNC_000022.7
NC_000023.7ChrX4099SubmittedNC_000023.7

Variant Region remap statusVariant Call remap status
Sequence IDChrVariant Regions on sourcePerfectGoodPassFailMultVariant Calls on sourcePerfectGoodPassFailMult
GPC_000000200.1Chr2505000003073070000
GPC_000000201.1Chr93130001071690020
NC_000001.7Chr1373510013093052002
NC_000003.8Chr3565500017026940008
NC_000004.8Chr440380011547451007323
NC_000005.7Chr5420002840004
NC_000006.8Chr61915000415513000025
NC_000007.10Chr7322730026292982660065
NC_000008.8Chr86361000241840000018
NC_000010.7Chr101714000374680006
NC_000011.7Chr1154000116140002
NC_000012.8Chr12545300012222160006
NC_000013.8Chr131010000034340000
NC_000014.6Chr14650001251300012
NC_000015.7Chr1555000016160000
NC_000017.8Chr1731000217300014
NC_000018.7Chr182522000354490005
NC_000019.8Chr19110000220000
NC_000020.8Chr2077000025250000
NC_000021.6Chr211110100026251000
NC_000022.7Chr22232300001491490000
NC_000023.7ChrX40320008998400015
Variant Region remap statusVariant Call remap status
Sequence IDChrVariant Regions on sourcePerfectGoodPassFailMultVariant Calls on sourcePerfectGoodPassFailMult
GPC_000000200.1Chr250471002307276150016
GPC_000000201.1Chr93130100071692000
NC_000001.7Chr137324001309244140051
NC_000003.8Chr3565310027026972003
NC_000004.8Chr440380011547451007323
NC_000005.7Chr5430001860002
NC_000006.8Chr61913000615512700028
NC_000007.10Chr7322430056292893190021
NC_000008.8Chr86358000541839300025
NC_000010.7Chr101716000174710003
NC_000011.7Chr1153000216120004
NC_000012.8Chr125450000422219600026
NC_000013.8Chr13109000134300004
NC_000014.6Chr14640002251000015
NC_000015.7Chr1555000016160000
NC_000017.8Chr1732000117150002
NC_000018.7Chr182521000454470007
NC_000019.8Chr19110000220000
NC_000020.8Chr2077000025250000
NC_000021.6Chr211110100026251000
NC_000022.7Chr222316700014959380052
NC_000023.7ChrX4038200099972000

Samplesets

Number of Samplesets: 3

Sampleset ID:
1
Name:
CEU
Description:
90 individuals (30 trios) of European ancestry, sampled in Utah, USA
Size:
90
Organisms:
Homo sapiens
Sampleset Phenotype(s):
None reported
  • Download Samples as CSV file
  • Samples for sampleset 1
    Sample IDCell TypeSubject ID SexEthnicitySubject AgeSubject Phenotype
    NA12812B-LymphocyteNA12812MaleUTAH/MORMONNot reported
    NA07348B-LymphocyteNA07348FemaleUTAH/MORMON45 YearsNot reported
    NA11993B-LymphocyteNA11993FemaleUTAH/MORMON80 YearsNot reported
    NA12813B-LymphocyteNA12813FemaleUTAH/MORMONNot reported
    NA12761B-LymphocyteNA12761FemaleUTAH/MORMONNot reported
    NA12154B-LymphocyteNA12154MaleUTAH/MORMON92 YearsNot reported
    NA12057B-LymphocyteNA12057FemaleUTAH/MORMON75 YearsNot reported
    NA10857B-LymphocyteNA10857MaleUTAH/MORMON47 YearsNot reported
    NA11839B-LymphocyteNA11839MaleUTAH/MORMON67 YearsNot reported
    NA12156B-LymphocyteNA12156FemaleUTAH/MORMON81 YearsNot reported
    NA11881B-LymphocyteNA11881MaleUTAH/MORMON62 YearsNot reported
    NA11831B-LymphocyteNA11831MaleUTAH/MORMON73 YearsNot reported
    NA06993B-LymphocyteNA06993MaleUTAH/MORMON74 YearsNot reported
    NA10830B-LymphocyteNA10830MaleUTAH/MORMON66 YearsNot reported
    NA10856B-LymphocyteNA10856MaleUTAH/MORMON46 YearsNot reported
    NA07048B-LymphocyteNA07048MaleUTAH/MORMON43 YearsNot reported
    NA12056B-LymphocyteNA12056MaleUTAH/MORMON79 YearsNot reported
    NA12236B-LymphocyteNA12236FemaleUTAH/MORMON86 YearsNot reported
    NA12751B-LymphocyteNA12751FemaleUTAH/MORMONNot reported
    NA12155B-LymphocyteNA12155MaleUTAH/MORMON86 YearsNot reported
    NA12146B-LymphocyteNA12146MaleUTAH/MORMON61 YearsNot reported
    NA12872B-LymphocyteNA12872MaleUTAH/MORMONNot reported
    NA12865B-LymphocyteNA12865FemaleUTAH/MORMONNot reported
    NA12249B-LymphocyteNA12249FemaleUTAH/MORMON77 YearsNot reported
    NA11830B-LymphocyteNA11830FemaleUTAH/MORMON63 YearsNot reported
    NA12892B-LymphocyteNA12892FemaleUTAH/MORMONNot reported
    NA12716B-LymphocyteNA12716MaleUTAH/MORMONNot reported
    NA10859B-LymphocyteNA10859FemaleUTAH/MORMON41 YearsNot reported
    NA10838B-LymphocyteNA10838MaleUTAH/MORMON60 YearsNot reported
    NA06991B-LymphocyteNA06991FemaleUTAH/MORMON42 YearsNot reported
    NA12760B-LymphocyteNA12760MaleUTAH/MORMONNot reported
    NA12763B-LymphocyteNA12763FemaleUTAH/MORMONNot reported
    NA11995B-LymphocyteNA11995FemaleUTAH/MORMON84 YearsNot reported
    NA10831B-LymphocyteNA10831FemaleUTAH/MORMON59 YearsNot reported
    NA11829B-LymphocyteNA11829MaleUTAH/MORMON72 YearsNot reported
    NA11992B-LymphocyteNA11992MaleUTAH/MORMON86 YearsNot reported
    NA12815B-LymphocyteNA12815FemaleUTAH/MORMONNot reported
    NA12043B-LymphocyteNA12043MaleUTAH/MORMON74 YearsNot reported
    NA12003B-LymphocyteNA12003MaleUTAH/MORMON97 YearsNot reported
    NA07022B-LymphocyteNA07022MaleUTAH/MORMON63 YearsNot reported
    NA10860B-LymphocyteNA10860MaleUTAH/MORMON50 YearsNot reported
    NA06985B-LymphocyteNA06985FemaleUTAH/MORMON69 YearsNot reported
    NA12044B-LymphocyteNA12044FemaleUTAH/MORMON70 YearsNot reported
    NA12234B-LymphocyteNA12234FemaleUTAH/MORMON74 YearsNot reported
    NA12264B-LymphocyteNA12264MaleUTAH/MORMON72 YearsNot reported
    NA12874B-LymphocyteNA12874MaleUTAH/MORMONNot reported
    NA10851B-LymphocyteNA10851MaleUTAH/MORMON52 YearsNot reported
    NA12145B-LymphocyteNA12145FemaleUTAH/MORMON70 YearsNot reported
    NA12752B-LymphocyteNA12752MaleUTAH/MORMONNot reported
    NA07029B-LymphocyteNA07029MaleUTAH/MORMON47 YearsNot reported
    NA12004B-LymphocyteNA12004FemaleUTAH/MORMON92 YearsNot reported
    NA07357B-LymphocyteNA07357MaleUTAH/MORMON69 YearsNot reported
    NA06994B-LymphocyteNA06994MaleUTAH/MORMON68 YearsNot reported
    NA12878B-LymphocyteNA12878FemaleUTAH/MORMONNot reported
    NA11840B-LymphocyteNA11840FemaleUTAH/MORMON67 YearsNot reported
    NA12864B-LymphocyteNA12864MaleUTAH/MORMONNot reported
    NA07034B-LymphocyteNA07034MaleUTAH/MORMON71 YearsNot reported
    NA12753B-LymphocyteNA12753FemaleUTAH/MORMONNot reported
    NA11994B-LymphocyteNA11994MaleUTAH/MORMON80 YearsNot reported
    NA12248B-LymphocyteNA12248MaleUTAH/MORMON89 YearsNot reported
    NA12005B-LymphocyteNA12005MaleUTAH/MORMON77 YearsNot reported
    NA07345B-LymphocyteNA07345FemaleUTAH/MORMON69 YearsNot reported
    NA10847B-LymphocyteNA10847FemaleUTAH/MORMON38 YearsNot reported
    NA10839B-LymphocyteNA10839FemaleUTAH/MORMON55 YearsNot reported
    NA12762B-LymphocyteNA12762MaleUTAH/MORMONNot reported
    NA12006B-LymphocyteNA12006FemaleUTAH/MORMON75 YearsNot reported
    NA12144B-LymphocyteNA12144MaleUTAH/MORMON71 YearsNot reported
    NA12891B-LymphocyteNA12891MaleUTAH/MORMONNot reported
    NA12814B-LymphocyteNA12814MaleUTAH/MORMONNot reported
    NA12801B-LymphocyteNA12801MaleUTAH/MORMONNot reported
    NA07055B-LymphocyteNA07055FemaleUTAH/MORMON70 YearsNot reported
    NA10863B-LymphocyteNA10863FemaleUTAH/MORMON43 YearsNot reported
    NA10855B-LymphocyteNA10855FemaleUTAH/MORMON37 YearsNot reported
    NA10854B-LymphocyteNA10854FemaleUTAH/MORMON42 YearsNot reported
    NA11882B-LymphocyteNA11882FemaleUTAH/MORMON61 YearsNot reported
    NA07019B-LymphocyteNA07019FemaleUTAH/MORMON45 YearsNot reported
    NA12717B-LymphocyteNA12717FemaleUTAH/MORMONNot reported
    NA12707B-LymphocyteNA12707MaleUTAH/MORMONNot reported
    NA10835B-LymphocyteNA10835MaleUTAH/MORMON39 YearsNot reported
    NA12873B-LymphocyteNA12873FemaleUTAH/MORMONNot reported
    NA07056B-LymphocyteNA07056FemaleUTAH/MORMON65 YearsNot reported
    NA12875B-LymphocyteNA12875FemaleUTAH/MORMONNot reported
    NA10861B-LymphocyteNA10861FemaleUTAH/MORMON49 YearsNot reported
    NA10846B-LymphocyteNA10846MaleUTAH/MORMON43 YearsNot reported
    NA12750B-LymphocyteNA12750MaleUTAH/MORMONNot reported
    NA12802B-LymphocyteNA12802FemaleUTAH/MORMONNot reported
    NA07000B-LymphocyteNA07000FemaleUTAH/MORMON66 YearsNot reported
    NA12740B-LymphocyteNA12740FemaleUTAH/MORMONNot reported
    NA11832B-LymphocyteNA11832FemaleUTAH/MORMON58 YearsNot reported
    NA12239B-LymphocyteNA12239FemaleUTAH/MORMON61 YearsNot reported
    Sampleset ID:
    2
    Name:
    YRI
    Description:
    90 individuals (30 trios) of Yoruba ancestry, sampled in Ibadan, Nigeria
    Size:
    90
    Organisms:
    Homo sapiens
    Sampleset Phenotype(s):
    None reported
  • Download Samples as CSV file
  • Samples for sampleset 2
    Sample IDCell TypeSubject ID SexEthnicitySubject Phenotype
    NA18862B-LymphocyteNA18862MaleYORUBANot reported
    NA19161B-LymphocyteNA19161MaleYORUBANot reported
    NA18870B-LymphocyteNA18870FemaleYORUBANot reported
    NA18502B-LymphocyteNA18502FemaleYORUBANot reported
    NA19145B-LymphocyteNA19145MaleYORUBANot reported
    NA19142B-LymphocyteNA19142MaleYORUBANot reported
    NA18912B-LymphocyteNA18912FemaleYORUBANot reported
    NA18863B-LymphocyteNA18863MaleYORUBANot reported
    NA19137B-LymphocyteNA19137FemaleYORUBANot reported
    NA18859B-LymphocyteNA18859MaleYORUBANot reported
    NA19094B-LymphocyteNA19094FemaleYORUBANot reported
    NA18913B-LymphocyteNA18913MaleYORUBANot reported
    NA18852B-LymphocyteNA18852FemaleYORUBANot reported
    NA19116B-LymphocyteNA19116FemaleYORUBANot reported
    NA19206B-LymphocyteNA19206FemaleYORUBANot reported
    NA19138B-LymphocyteNA19138MaleYORUBANot reported
    NA19098B-LymphocyteNA19098MaleYORUBANot reported
    NA18858B-LymphocyteNA18858FemaleYORUBANot reported
    NA19240B-LymphocyteNA19240FemaleYORUBANot reported
    NA19092B-LymphocyteNA19092MaleYORUBANot reported
    NA19207B-LymphocyteNA19207MaleYORUBANot reported
    NA19099B-LymphocyteNA19099FemaleYORUBANot reported
    NA19210B-LymphocyteNA19210MaleYORUBANot reported
    NA19132B-LymphocyteNA19132FemaleYORUBANot reported
    NA19119B-LymphocyteNA19119MaleYORUBANot reported
    NA19203B-LymphocyteNA19203MaleYORUBANot reported
    NA19103B-LymphocyteNA19103MaleYORUBANot reported
    NA18855B-LymphocyteNA18855FemaleYORUBANot reported
    NA19211B-LymphocyteNA19211MaleYORUBANot reported
    NA18854B-LymphocyteNA18854MaleYORUBANot reported
    NA19159B-LymphocyteNA19159FemaleYORUBANot reported
    NA19208B-LymphocyteNA19208MaleYORUBANot reported
    NA19127B-LymphocyteNA19127FemaleYORUBANot reported
    NA18856B-LymphocyteNA18856MaleYORUBANot reported
    NA19222B-LymphocyteNA19222FemaleYORUBANot reported
    NA18861B-LymphocyteNA18861FemaleYORUBANot reported
    NA19209B-LymphocyteNA19209FemaleYORUBANot reported
    NA19205B-LymphocyteNA19205MaleYORUBANot reported
    NA19171B-LymphocyteNA19171MaleYORUBANot reported
    NA19154B-LymphocyteNA19154MaleYORUBANot reported
    NA18853B-LymphocyteNA18853MaleYORUBANot reported
    NA19200B-LymphocyteNA19200MaleYORUBANot reported
    NA19144B-LymphocyteNA19144MaleYORUBANot reported
    NA18860B-LymphocyteNA18860MaleYORUBANot reported
    NA18857B-LymphocyteNA18857MaleYORUBANot reported
    NA18501B-LymphocyteNA18501MaleYORUBANot reported
    NA19201B-LymphocyteNA19201FemaleYORUBANot reported
    NA19192B-LymphocyteNA19192MaleYORUBANot reported
    NA19221B-LymphocyteNA19221FemaleYORUBANot reported
    NA18508B-LymphocyteNA18508FemaleYORUBANot reported
    NA18505B-LymphocyteNA18505FemaleYORUBANot reported
    NA19239B-LymphocyteNA19239MaleYORUBANot reported
    NA18500B-LymphocyteNA18500MaleYORUBANot reported
    NA19204B-LymphocyteNA19204FemaleYORUBANot reported
    NA19143B-LymphocyteNA19143FemaleYORUBANot reported
    NA19141B-LymphocyteNA19141MaleYORUBANot reported
    NA19140B-LymphocyteNA19140FemaleYORUBANot reported
    NA18872B-LymphocyteNA18872MaleYORUBANot reported
    NA19193B-LymphocyteNA19193FemaleYORUBANot reported
    NA19153B-LymphocyteNA19153MaleYORUBANot reported
    NA19172B-LymphocyteNA19172FemaleYORUBANot reported
    NA19202B-LymphocyteNA19202FemaleYORUBANot reported
    NA19152B-LymphocyteNA19152FemaleYORUBANot reported
    NA19238B-LymphocyteNA19238FemaleYORUBANot reported
    NA18914B-LymphocyteNA18914MaleYORUBANot reported
    NA19173B-LymphocyteNA19173MaleYORUBANot reported
    NA18506B-LymphocyteNA18506MaleYORUBANot reported
    NA19131B-LymphocyteNA19131FemaleYORUBANot reported
    NA19102B-LymphocyteNA19102FemaleYORUBANot reported
    NA19120B-LymphocyteNA19120MaleYORUBANot reported
    NA19093B-LymphocyteNA19093FemaleYORUBANot reported
    NA18522B-LymphocyteNA18522MaleYORUBANot reported
    NA19160B-LymphocyteNA19160MaleYORUBANot reported
    NA19128B-LymphocyteNA19128MaleYORUBANot reported
    NA18523B-LymphocyteNA18523FemaleYORUBANot reported
    NA18516B-LymphocyteNA18516MaleYORUBANot reported
    NA19223B-LymphocyteNA19223MaleYORUBANot reported
    NA19194B-LymphocyteNA19194MaleYORUBANot reported
    NA18503B-LymphocyteNA18503MaleYORUBANot reported
    NA19139B-LymphocyteNA19139MaleYORUBANot reported
    NA18871B-LymphocyteNA18871MaleYORUBANot reported
    NA18507B-LymphocyteNA18507MaleYORUBANot reported
    NA19101B-LymphocyteNA19101MaleYORUBANot reported
    NA19129B-LymphocyteNA19129FemaleYORUBANot reported
    NA18521B-LymphocyteNA18521MaleYORUBANot reported
    NA19100B-LymphocyteNA19100FemaleYORUBANot reported
    NA18517B-LymphocyteNA18517FemaleYORUBANot reported
    NA18504B-LymphocyteNA18504MaleYORUBANot reported
    NA19130B-LymphocyteNA19130MaleYORUBANot reported
    NA18515B-LymphocyteNA18515MaleYORUBANot reported
    Sampleset ID:
    3
    Name:
    JCH
    Description:
    45 unrelated individuals of Han Chinese ancestry, sampled in Beijing plus 44 individuals of Japanese ancestry, sampled in Tokyo
    Size:
    89
    Organisms:
    Homo sapiens
    Sampleset Phenotype(s):
    None reported
  • Download Samples as CSV file
  • Samples for sampleset 3
    Sample IDCell TypeSubject ID SexEthnicitySubject Phenotype
    NA18991B-LymphocyteNA18991FemaleJAPANESENot reported
    NA18570B-LymphocyteNA18570FemaleHAN CHINESENot reported
    NA18997B-LymphocyteNA18997FemaleJAPANESENot reported
    NA18594B-LymphocyteNA18594FemaleHAN CHINESENot reported
    NA18577B-LymphocyteNA18577FemaleHAN CHINESENot reported
    NA18976B-LymphocyteNA18976FemaleJAPANESENot reported
    NA18611B-LymphocyteNA18611MaleHAN CHINESENot reported
    NA18558B-LymphocyteNA18558MaleHAN CHINESENot reported
    NA18582B-LymphocyteNA18582FemaleHAN CHINESENot reported
    NA18603B-LymphocyteNA18603MaleHAN CHINESENot reported
    NA18608B-LymphocyteNA18608MaleHAN CHINESENot reported
    NA18942B-LymphocyteNA18942FemaleJAPANESENot reported
    NA18948B-LymphocyteNA18948MaleJAPANESENot reported
    NA18609B-LymphocyteNA18609MaleHAN CHINESENot reported
    NA18960B-LymphocyteNA18960MaleJAPANESENot reported
    NA18532B-LymphocyteNA18532FemaleHAN CHINESENot reported
    NA18636B-LymphocyteNA18636MaleHAN CHINESENot reported
    NA18943B-LymphocyteNA18943MaleJAPANESENot reported
    NA18566B-LymphocyteNA18566FemaleHAN CHINESENot reported
    NA18635B-LymphocyteNA18635MaleHAN CHINESENot reported
    NA19003B-LymphocyteNA19003FemaleJAPANESENot reported
    NA18952B-LymphocyteNA18952MaleJAPANESENot reported
    NA18605B-LymphocyteNA18605MaleHAN CHINESENot reported
    NA18563B-LymphocyteNA18563MaleHAN CHINESENot reported
    NA18537B-LymphocyteNA18537FemaleHAN CHINESENot reported
    NA18945B-LymphocyteNA18945MaleJAPANESENot reported
    NA18981B-LymphocyteNA18981FemaleJAPANESENot reported
    NA18637B-LymphocyteNA18637MaleHAN CHINESENot reported
    NA18540B-LymphocyteNA18540FemaleHAN CHINESENot reported
    NA18990B-LymphocyteNA18990MaleJAPANESENot reported
    NA18949B-LymphocyteNA18949FemaleJAPANESENot reported
    NA18992B-LymphocyteNA18992FemaleJAPANESENot reported
    NA18555B-LymphocyteNA18555FemaleHAN CHINESENot reported
    NA18998B-LymphocyteNA18998FemaleJAPANESENot reported
    NA19007B-LymphocyteNA19007MaleJAPANESENot reported
    NA18526B-LymphocyteNA18526FemaleHAN CHINESENot reported
    NA18612B-LymphocyteNA18612MaleHAN CHINESENot reported
    NA18564B-LymphocyteNA18564FemaleHAN CHINESENot reported
    NA18956B-LymphocyteNA18956FemaleJAPANESENot reported
    NA18951B-LymphocyteNA18951FemaleJAPANESENot reported
    NA18633B-LymphocyteNA18633MaleHAN CHINESENot reported
    NA18542B-LymphocyteNA18542FemaleHAN CHINESENot reported
    NA18593B-LymphocyteNA18593FemaleHAN CHINESENot reported
    NA18561B-LymphocyteNA18561MaleHAN CHINESENot reported
    NA18974B-LymphocyteNA18974MaleJAPANESENot reported
    NA18959B-LymphocyteNA18959MaleJAPANESENot reported
    NA18965B-LymphocyteNA18965MaleJAPANESENot reported
    NA18550B-LymphocyteNA18550FemaleHAN CHINESENot reported
    NA18970B-LymphocyteNA18970MaleJAPANESENot reported
    NA18987B-LymphocyteNA18987FemaleJAPANESENot reported
    NA18953B-LymphocyteNA18953MaleJAPANESENot reported
    NA18620B-LymphocyteNA18620MaleHAN CHINESENot reported
    NA18529B-LymphocyteNA18529FemaleHAN CHINESENot reported
    NA18579B-LymphocyteNA18579FemaleHAN CHINESENot reported
    NA18562B-LymphocyteNA18562MaleHAN CHINESENot reported
    NA18964B-LymphocyteNA18964FemaleJAPANESENot reported
    NA18573B-LymphocyteNA18573FemaleHAN CHINESENot reported
    NA18971B-LymphocyteNA18971MaleJAPANESENot reported
    NA18999B-LymphocyteNA18999FemaleJAPANESENot reported
    NA18973B-LymphocyteNA18973FemaleJAPANESENot reported
    NA18623B-LymphocyteNA18623MaleHAN CHINESENot reported
    NA18571B-LymphocyteNA18571FemaleHAN CHINESENot reported
    NA18545B-LymphocyteNA18545FemaleHAN CHINESENot reported
    NA18632B-LymphocyteNA18632MaleHAN CHINESENot reported
    NA18994B-LymphocyteNA18994MaleJAPANESENot reported
    NA18961B-LymphocyteNA18961MaleJAPANESENot reported
    NA19000B-LymphocyteNA19000MaleJAPANESENot reported
    NA18944B-LymphocyteNA18944MaleJAPANESENot reported
    NA18622B-LymphocyteNA18622MaleHAN CHINESENot reported
    NA18940B-LymphocyteNA18940MaleJAPANESENot reported
    NA19005B-LymphocyteNA19005MaleJAPANESENot reported
    NA18969B-LymphocyteNA18969FemaleJAPANESENot reported
    NA18967B-LymphocyteNA18967MaleJAPANESENot reported
    NA18624B-LymphocyteNA18624MaleHAN CHINESENot reported
    NA18980B-LymphocyteNA18980FemaleJAPANESENot reported
    NA18547B-LymphocyteNA18547FemaleHAN CHINESENot reported
    NA18524B-LymphocyteNA18524MaleHAN CHINESENot reported
    NA18972B-LymphocyteNA18972FemaleJAPANESENot reported
    NA18572B-LymphocyteNA18572MaleHAN CHINESENot reported
    NA18947B-LymphocyteNA18947FemaleJAPANESENot reported
    NA18966B-LymphocyteNA18966MaleJAPANESENot reported
    NA18576B-LymphocyteNA18576FemaleHAN CHINESENot reported
    NA18978B-LymphocyteNA18978FemaleJAPANESENot reported
    NA18621B-LymphocyteNA18621MaleHAN CHINESENot reported
    NA18995B-LymphocyteNA18995MaleJAPANESENot reported
    NA18975B-LymphocyteNA18975FemaleJAPANESENot reported
    NA18552B-LymphocyteNA18552FemaleHAN CHINESENot reported
    NA18592B-LymphocyteNA18592FemaleHAN CHINESENot reported
    NA18968B-LymphocyteNA18968FemaleJAPANESENot reported

    Experimental Details

    Experiment IDTypeMethodAnalysisDataNumber of Variant Calls
    1DiscoverySNP arraySNP genotyping analysisftp://ftp.hapmap.org/hapmap/genotypes/2005-03_16a_phaseI/full/redundant-unfiltered/1,642
    2DiscoverySNP arraySNP genotyping analysisftp://ftp.hapmap.org/hapmap/genotypes/2005-03_16a_phaseI/full/redundant-unfiltered/2,206
    3DiscoverySNP arraySNP genotyping analysisftp://ftp.hapmap.org/hapmap/genotypes/2005-03_16a_phaseI/full/redundant-unfiltered/57

    Validations

    No validation data were submitted for this study.

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