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dbVar

Database of genomic structural variation

esv3815822

Organism: Homo sapiens

Study:estd192 (COSMIC)
Variant Type:inversion
Method Type:Curated
Submitted on:GRCh37

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:21

Description:
Chr3:g.(27533326_27533346)_(123373884_123373904)inv
Publication(s):Forbes et al. 2008, Forbes et al. 2008

Links to Other Resources

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 55 SVs from 16 studies. See in: genome view

Remapped(Score: Perfect):27,491,835-27,491,855

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv3815822	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	27,491,835	27,491,855	27,491,835	27,491,855
esv3815822	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	123,655,037	123,655,057	123,655,037	123,655,057
esv3815822	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	27,533,326	27,533,346	27,533,326	27,533,346
esv3815822	Submitted genomic		GRCh37 (hg19)	Primary Assembly		NC_000003.11	Chr3	123,373,884	123,373,904	123,373,884	123,373,904

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv16645768	inversion	2196306	Curated	Curated	227

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv16645768	Remapped	Perfect	NC_000003.12:g.(27 491835_27491855)_( 27491835_27491855) invNC_000003.12:g. (123655037_1236550 57)_(123655037_123 655057)inv	GRCh38.p12	First Pass	NC_000003.12	Chr3	27,491,835	27,491,855	27,491,835	27,491,855
essv16645768	Remapped	Perfect	NC_000003.12:g.(27 491835_27491855)_( 27491835_27491855) invNC_000003.12:g. (123655037_1236550 57)_(123655037_123 655057)inv	GRCh38.p12	First Pass	NC_000003.12	Chr3	123,655,037	123,655,057	123,655,037	123,655,057
essv16645768	Submitted genomic		[NC_000003.11:g.(1 23373884_123373904 )_(123373884_12337 3904)inv];[NC_0000 03.11:g.(27533326_ 27533346)_(2753332 6_27533346)inv]	GRCh37 (hg19)		NC_000003.11	Chr3	27,533,326	27,533,346	27,533,326	27,533,346
essv16645768	Submitted genomic		[NC_000003.11:g.(1 23373884_123373904 )_(123373884_12337 3904)inv];[NC_0000 03.11:g.(27533326_ 27533346)_(2753332 6_27533346)inv]	GRCh37 (hg19)		NC_000003.11	Chr3	123,373,884	123,373,904	123,373,884	123,373,904

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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