esv3901674
- Organism: Homo sapiens
- Study:estd225 (Magnusson et al. 2016)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:GRCh37 (hg19)
- Variant Calls:2
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,712
- Publication(s):Magnusson et al. 2016
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 109 SVs from 27 studies. See in: genome view
Overlapping variant regions from other studies: 109 SVs from 27 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv3901674 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000003.12 | Chr3 | 57,599,679 | 57,602,390 |
| esv3901674 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000003.11 | Chr3 | 57,585,406 | 57,588,117 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis | Copy number |
|---|---|---|---|---|
| essv25822537 | copy number gain | SNP array | SNP genotyping analysis | 3 |
| essv25822538 | copy number gain | SNP array | SNP genotyping analysis | 3 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv25822537 | Remapped | Perfect | NC_000003.12:g.575 99679_57602390dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 57,599,679 | 57,602,390 |
| essv25822538 | Remapped | Perfect | NC_000003.12:g.575 99679_57602390dup | GRCh38.p12 | First Pass | NC_000003.12 | Chr3 | 57,599,679 | 57,602,390 |
| essv25822537 | Submitted genomic | NC_000003.11:g.575 85406_57588117dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 57,585,406 | 57,588,117 | ||
| essv25822538 | Submitted genomic | NC_000003.11:g.575 85406_57588117dup | GRCh37 (hg19) | NC_000003.11 | Chr3 | 57,585,406 | 57,588,117 |