esv2761959
- Organism: Homo sapiens
- Study:estd203 (Vogler et al. 2010)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:243,642
- Publication(s):Vogler et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1307 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 1341 SVs from 91 studies. See in: genome view
Overlapping variant regions from other studies: 360 SVs from 28 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
esv2761959 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000017.11 | Chr17 | 43,322,294 | 43,565,935 |
esv2761959 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000017.10 | Chr17 | 41,399,657 | 41,643,303 |
esv2761959 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000017.9 | Chr17 | 38,755,183 | 38,998,829 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv7002143 | copy number gain | SW_0885 | SNP array | SNP genotyping analysis | 50 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
essv7002143 | Remapped | Good | NC_000017.11:g.(?_ 43322294)_(4356593 5_?)dup | GRCh38.p12 | First Pass | NC_000017.11 | Chr17 | 43,322,294 | 43,565,935 |
essv7002143 | Remapped | Perfect | NC_000017.10:g.(?_ 41399657)_(4164330 3_?)dup | GRCh37.p13 | First Pass | NC_000017.10 | Chr17 | 41,399,657 | 41,643,303 |
essv7002143 | Submitted genomic | NC_000017.9:g.(?_3 8755183)_(38998829 _?)dup | NCBI36 (hg18) | NC_000017.9 | Chr17 | 38,755,183 | 38,998,829 |