esv1006063
- Organism: Homo sapiens
- Study:estd180 (Pang et al. 2010)
- Variant Type:copy number variation
- Method Type:Oligo aCGH
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:16,506
- Publication(s):Pang et al. 2010
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 272 SVs from 54 studies. See in: genome view
Overlapping variant regions from other studies: 102 SVs from 32 studies. See in: genome view
Overlapping variant regions from other studies: 298 SVs from 59 studies. See in: genome view
Overlapping variant regions from other studies: 60 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv1006063 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000019.10 | Chr19 | 39,878,192 | 39,894,697 |
| esv1006063 | Remapped | Perfect | GRCh38.p12 | PATCHES | Second Pass | NW_009646206.1 | Chr19|NW_0 09646206.1 | 138,068 | 154,573 |
| esv1006063 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000019.9 | Chr19 | 40,368,832 | 40,385,337 |
| esv1006063 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000019.8 | Chr19 | 45,060,672 | 45,077,177 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv3586150 | Remapped | Perfect | NW_009646206.1:g.( ?_138068)_(154573_ ?)dup | GRCh38.p12 | Second Pass | NW_009646206.1 | Chr19|NW_0 09646206.1 | 138,068 | 154,573 |
| essv3586150 | Remapped | Perfect | NC_000019.10:g.(?_ 39878192)_(3989469 7_?)dup | GRCh38.p12 | First Pass | NC_000019.10 | Chr19 | 39,878,192 | 39,894,697 |
| essv3586150 | Remapped | Perfect | NC_000019.9:g.(?_4 0368832)_(40385337 _?)dup | GRCh37.p13 | First Pass | NC_000019.9 | Chr19 | 40,368,832 | 40,385,337 |
| essv3586150 | Submitted genomic | NC_000019.8:g.(?_4 5060672)_(45077177 _?)dup | NCBI36 (hg18) | NC_000019.8 | Chr19 | 45,060,672 | 45,077,177 |