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dbVar

Database of genomic structural variation

esv1007420

Organism: Homo sapiens

Study:estd180 (Pang et al. 2010)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:21,841

Publication(s):Pang et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 434 SVs from 65 studies. See in: genome view

Remapped(Score: Pass):81,411,536-81,433,376

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
esv1007420	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000017.11	Chr17	81,411,536	81,433,376
esv1007420	Remapped	Perfect	GRCh37.p13	Primary Assembly	Second Pass	NC_000017.10	Chr17	79,385,336	79,400,402
esv1007420	Remapped	Pass	GRCh37.p13	PATCHES	First Pass	NW_003871087.1	Chr17\|NW_0 03871087.1	66,174	88,014
esv1007420	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000017.9	Chr17	76,999,931	77,014,997

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv3564196	insertion	HuRef	Sequencing	Paired-end mapping	23,887

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
essv3564196	Remapped	Pass	NC_000017.11:g.(81 411536_?)_(?_81433 376)ins11343	GRCh38.p12	First Pass	NC_000017.11	Chr17	81,411,536	81,433,376
essv3564196	Remapped	Pass	NW_003871087.1:g.( 66174_?)_(?_88014) ins11343	GRCh37.p13	First Pass	NW_003871087.1	Chr17\|NW_0 03871087.1	66,174	88,014
essv3564196	Remapped	Perfect	NC_000017.10:g.(79 385336_?)_(?_79400 402)ins11343	GRCh37.p13	Second Pass	NC_000017.10	Chr17	79,385,336	79,400,402
essv3564196	Submitted genomic		NC_000017.9:g.(769 99931_?)_(?_770149 97)ins11343	NCBI36 (hg18)		NC_000017.9	Chr17	76,999,931	77,014,997

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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