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dbVar

Database of genomic structural variation

esv1008241

Organism: Homo sapiens

Study:estd180 (Pang et al. 2010)
Variant Type:insertion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:26,391

Publication(s):Pang et al. 2010

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 153 SVs from 43 studies. See in: genome view

Remapped(Score: Perfect):112,150,996-112,167,901

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
esv1008241	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	112,150,996	112,167,901
esv1008241	Remapped	Pass	GRCh38.p12	PATCHES	Second Pass	NW_019805492.1	Chr3\|NW_01 9805492.1	34,286	60,676
esv1008241	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	111,869,843	111,886,748
esv1008241	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000003.10	Chr3	113,352,533	113,369,438

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv3563639	insertion	HuRef	Sequencing	Paired-end mapping	23,887

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Outer Stop
essv3563639	Remapped	Pass	NW_019805492.1:g.( 34286_?)_(?_60676) ins14324	GRCh38.p12	Second Pass	NW_019805492.1	Chr3\|NW_01 9805492.1	34,286	60,676
essv3563639	Remapped	Perfect	NC_000003.12:g.(11 2150996_?)_(?_1121 67901)ins14324	GRCh38.p12	First Pass	NC_000003.12	Chr3	112,150,996	112,167,901
essv3563639	Remapped	Perfect	NC_000003.11:g.(11 1869843_?)_(?_1118 86748)ins14324	GRCh37.p13	First Pass	NC_000003.11	Chr3	111,869,843	111,886,748
essv3563639	Submitted genomic		NC_000003.10:g.(11 3352533_?)_(?_1133 69438)ins14324	NCBI36 (hg18)		NC_000003.10	Chr3	113,352,533	113,369,438

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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