Warning: The NCBI web site requires JavaScript to function. more...

dbVar

Database of genomic structural variation

esv1226673

Organism: Homo sapiens

Study:estd22 (Levy et al. 2007)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:3,124

Publication(s):Levy et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 545 SVs from 37 studies. See in: genome view

Remapped(Score: Good):154,395,056-154,398,179

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv1226673	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	154,395,056	154,398,179
esv1226673	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	153,623,398	153,626,520
esv1226673	Remapped	Good	GRCh37.p13	PATCHES	Second Pass	NW_003871103.3	ChrX\|NW_00 3871103.3	1,829,035	1,832,158
esv1226673	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000023.9	ChrX	153,276,592	153,279,714

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv4159804	inversion	HuRef	Sequencing	Sequence alignment	780,358

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv4159804	Remapped	Good	NC_000023.11:g.154 395056_154398179in v	GRCh38.p12	First Pass	NC_000023.11	ChrX	154,395,056	154,398,179
essv4159804	Remapped	Good	NW_003871103.3:g.1 829035_1832158inv	GRCh37.p13	Second Pass	NW_003871103.3	ChrX\|NW_00 3871103.3	1,829,035	1,832,158
essv4159804	Remapped	Perfect	NC_000023.10:g.153 623398_153626520in v	GRCh37.p13	First Pass	NC_000023.10	ChrX	153,623,398	153,626,520
essv4159804	Submitted genomic		NC_000023.9:g.1532 76592_153279714inv	NCBI36 (hg18)		NC_000023.9	ChrX	153,276,592	153,279,714

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

You are here: NCBI