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dbVar

Database of genomic structural variation

esv1449016

Organism: Homo sapiens

Study:estd22 (Levy et al. 2007)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:5,697

Publication(s):Levy et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 660 SVs from 75 studies. See in: genome view

Remapped(Score: Pass):23,950,336-23,956,032

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv1449016	Remapped	Pass	GRCh38.p12	Primary Assembly	First Pass	NC_000022.11	Chr22	23,950,336	23,956,032
esv1449016	Remapped	Pass	GRCh38.p12	ALT_REF_LOCI_1	Second Pass	NT_187633.1	Chr22\|NT_1 87633.1	186,698	192,394
esv1449016	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000022.10	Chr22	24,292,523	24,302,218
esv1449016	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000022.9	Chr22	22,622,523	22,632,218

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv4157089	inversion	HuRef	Sequencing	Sequence alignment	780,358

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv4157089	Remapped	Pass	NT_187633.1:g.1866 98_192394inv	GRCh38.p12	Second Pass	NT_187633.1	Chr22\|NT_1 87633.1	186,698	192,394
essv4157089	Remapped	Pass	NC_000022.11:g.239 50336_23956032inv	GRCh38.p12	First Pass	NC_000022.11	Chr22	23,950,336	23,956,032
essv4157089	Remapped	Perfect	NC_000022.10:g.242 92523_24302218inv	GRCh37.p13	First Pass	NC_000022.10	Chr22	24,292,523	24,302,218
essv4157089	Submitted genomic		NC_000022.9:g.2262 2523_22632218inv	NCBI36 (hg18)		NC_000022.9	Chr22	22,622,523	22,632,218

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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