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dbVar

Database of genomic structural variation

esv1589182

Organism: Homo sapiens

Study:estd22 (Levy et al. 2007)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:13,758

Publication(s):Levy et al. 2007

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 470 SVs from 34 studies. See in: genome view

Remapped(Score: Good):150,403,086-150,416,843

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Start	Stop
esv1589182	Remapped	Good	GRCh38.p12	Primary Assembly	First Pass	NC_000023.11	ChrX	150,403,086	150,416,843
esv1589182	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000023.10	ChrX	149,571,520	149,585,292
esv1589182	Remapped	Good	GRCh37.p13	PATCHES	Second Pass	NW_004070890.2	ChrX\|NW_00 4070890.2	5,927,484	5,941,241
esv1589182	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000023.9	ChrX	149,322,178	149,335,950

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv4345029	inversion	HuRef	Sequencing	Sequence alignment	780,358

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Start	Stop
essv4345029	Remapped	Good	NC_000023.11:g.150 403086_150416843in v	GRCh38.p12	First Pass	NC_000023.11	ChrX	150,403,086	150,416,843
essv4345029	Remapped	Good	NW_004070890.2:g.5 927484_5941241inv	GRCh37.p13	Second Pass	NW_004070890.2	ChrX\|NW_00 4070890.2	5,927,484	5,941,241
essv4345029	Remapped	Perfect	NC_000023.10:g.149 571520_149585292in v	GRCh37.p13	First Pass	NC_000023.10	ChrX	149,571,520	149,585,292
essv4345029	Submitted genomic		NC_000023.9:g.1493 22178_149335950inv	NCBI36 (hg18)		NC_000023.9	ChrX	149,322,178	149,335,950

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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