esv1838633
- Organism: Homo sapiens
- Study:estd188 (Pinto et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:798,202
- Publication(s):Pinto et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 2904 SVs from 101 studies. See in: genome view
Overlapping variant regions from other studies: 1221 SVs from 85 studies. See in: genome view
Overlapping variant regions from other studies: 2268 SVs from 95 studies. See in: genome view
Overlapping variant regions from other studies: 61 SVs from 14 studies. See in: genome view
Overlapping variant regions from other studies: 2811 SVs from 98 studies. See in: genome view
Overlapping variant regions from other studies: 1231 SVs from 27 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|---|
esv1838633 | Remapped | Pass | GRCh38.p12 | Primary Assembly | Second Pass | NC_000007.14 | Chr7 | - | 61,578,038 | 62,376,239 |
esv1838633 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | - | 62,180,400 | 62,294,432 |
esv1838633 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 62,308,236 | 62,308,236 | 62,513,723 |
esv1838633 | Remapped | Pass | GRCh38.p12 | Primary Assembly | Second Pass | NT_187383.1 | Chr16|NT_1 87383.1 | - | 334,948 | 610,813 |
esv1838633 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 61,752,487 | 61,752,487 | 61,974,101 |
esv1838633 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 61,389,922 | 61,396,078 | 61,611,536 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|---|
essv4387935 | Remapped | Pass | NC_000007.14:g.(?_ 61578038)_(6237623 9_?)dupNC_000007.1 4:g.(62308236_6230 8236)_(62513723_?) dupNT_187383.1:g.( ?_334948)_(610813_ ?)dupNC_000007.14: g.(?_62180400)_(62 294432_?)dup | GRCh38.p12 | Second Pass | NC_000007.14 | Chr7 | - | 61,578,038 | 62,376,239 |
essv4387935 | Remapped | Pass | NC_000007.14:g.(?_ 61578038)_(6237623 9_?)dupNC_000007.1 4:g.(62308236_6230 8236)_(62513723_?) dupNT_187383.1:g.( ?_334948)_(610813_ ?)dupNC_000007.14: g.(?_62180400)_(62 294432_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | - | 62,180,400 | 62,294,432 |
essv4387935 | Remapped | Pass | NC_000007.14:g.(?_ 61578038)_(6237623 9_?)dupNC_000007.1 4:g.(62308236_6230 8236)_(62513723_?) dupNT_187383.1:g.( ?_334948)_(610813_ ?)dupNC_000007.14: g.(?_62180400)_(62 294432_?)dup | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 62,308,236 | 62,308,236 | 62,513,723 |
essv4387935 | Remapped | Pass | NC_000007.14:g.(?_ 61578038)_(6237623 9_?)dupNC_000007.1 4:g.(62308236_6230 8236)_(62513723_?) dupNT_187383.1:g.( ?_334948)_(610813_ ?)dupNC_000007.14: g.(?_62180400)_(62 294432_?)dup | GRCh38.p12 | Second Pass | NT_187383.1 | Chr16|NT_1 87383.1 | - | 334,948 | 610,813 |
essv4387935 | Remapped | Perfect | NC_000007.13:g.(61 752487_61752487)_( 61974101_?)dup | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 61,752,487 | 61,752,487 | 61,974,101 |
essv4387935 | Submitted genomic | NC_000007.12:g.(61 389922_61396078)_( 61611536_?)dup | NCBI36 (hg18) | NC_000007.12 | Chr7 | 61,389,922 | 61,396,078 | 61,611,536 |