esv2429041
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:2,848
- Description:originalFile=Yoruban_inv.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 160 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 156 SVs from 40 studies. See in: genome view
Overlapping variant regions from other studies: 31 SVs from 20 studies. See in: genome view
Overlapping variant regions from other studies: 44 SVs from 12 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv2429041 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 106,720,718 | 106,721,300 | 106,723,010 | 106,723,565 |
| esv2429041 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | Second Pass | NC_000006.11 | Chr6 | 107,168,593 | 107,169,175 | 107,170,885 | 107,171,440 |
| esv2429041 | Remapped | Perfect | GRCh37.p13 | PATCHES | First Pass | NW_004504300.1 | Chr6|NW_00 4504300.1 | 25,341 | 25,923 | 27,633 | 28,188 |
| esv2429041 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 107,275,286 | 107,275,868 | 107,277,578 | 107,278,133 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv5233500 | Remapped | Perfect | NC_000006.12:g.(10 6720718_106721300) _(106723010_106723 565)inv | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 106,720,718 | 106,721,300 | 106,723,010 | 106,723,565 |
| essv5233500 | Remapped | Perfect | NW_004504300.1:g.( 25341_25923)_(2763 3_28188)inv | GRCh37.p13 | First Pass | NW_004504300.1 | Chr6|NW_00 4504300.1 | 25,341 | 25,923 | 27,633 | 28,188 |
| essv5233500 | Remapped | Perfect | NC_000006.11:g.(10 7168593_107169175) _(107170885_107171 440)inv | GRCh37.p13 | Second Pass | NC_000006.11 | Chr6 | 107,168,593 | 107,169,175 | 107,170,885 | 107,171,440 |
| essv5233500 | Submitted genomic | NC_000006.10:g.(10 7275286_107275868) _(107277578_107278 133)inv | NCBI36 (hg18) | NC_000006.10 | Chr6 | 107,275,286 | 107,275,868 | 107,277,578 | 107,278,133 |