esv2429446
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,644
- Description:originalFile=Yoruban_inv.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 138 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 138 SVs from 28 studies. See in: genome view
Overlapping variant regions from other studies: 54 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv2429446 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000002.12 | Chr2 | 221,702,905 | 221,703,647 | 221,704,408 | 221,704,548 |
| esv2429446 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000002.11 | Chr2 | 222,567,625 | 222,568,367 | 222,569,128 | 222,569,268 |
| esv2429446 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000002.10 | Chr2 | 222,275,869 | 222,276,611 | 222,277,372 | 222,277,512 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv5190099 | Remapped | Perfect | NC_000002.12:g.(22 1702905_221703647) _(221704408_221704 548)inv | GRCh38.p12 | First Pass | NC_000002.12 | Chr2 | 221,702,905 | 221,703,647 | 221,704,408 | 221,704,548 |
| essv5190099 | Remapped | Perfect | NC_000002.11:g.(22 2567625_222568367) _(222569128_222569 268)inv | GRCh37.p13 | First Pass | NC_000002.11 | Chr2 | 222,567,625 | 222,568,367 | 222,569,128 | 222,569,268 |
| essv5190099 | Submitted genomic | NC_000002.10:g.(22 2275869_222276611) _(222277372_222277 512)inv | NCBI36 (hg18) | NC_000002.10 | Chr2 | 222,275,869 | 222,276,611 | 222,277,372 | 222,277,512 |