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dbVar

Database of genomic structural variation

esv2439266

Organism: Homo sapiens

Study:estd197 (McKernan et al. 2009)
Variant Type:inversion
Method Type:Sequencing
Submitted on:NCBI36 (hg18)

Variant Calls:1
Validation:Not tested
Clinical Assertions: No
Region Size:2,150

Description:originalFile=Yoruban_inv.gff
Publication(s):McKernan et al. 2009

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 165 SVs from 45 studies. See in: genome view

Remapped(Score: Perfect):13,062,087-13,064,236

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
esv2439266	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000010.11	Chr10	13,062,087	13,062,995	13,063,274	13,064,236
esv2439266	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000010.10	Chr10	13,104,087	13,104,995	13,105,274	13,106,236
esv2439266	Submitted genomic		NCBI36 (hg18)	Primary Assembly		NC_000010.9	Chr10	13,144,093	13,145,001	13,145,280	13,146,242

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv5192548	inversion	NA18507	Sequencing	Paired-end mapping	232,775

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Outer Start	Inner Start	Inner Stop	Outer Stop
essv5192548	Remapped	Perfect	NC_000010.11:g.(13 062087_13062995)_( 13063274_13064236) inv	GRCh38.p12	First Pass	NC_000010.11	Chr10	13,062,087	13,062,995	13,063,274	13,064,236
essv5192548	Remapped	Perfect	NC_000010.10:g.(13 104087_13104995)_( 13105274_13106236) inv	GRCh37.p13	First Pass	NC_000010.10	Chr10	13,104,087	13,104,995	13,105,274	13,106,236
essv5192548	Submitted genomic		NC_000010.9:g.(131 44093_13145001)_(1 3145280_13146242)i nv	NCBI36 (hg18)		NC_000010.9	Chr10	13,144,093	13,145,001	13,145,280	13,146,242

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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