esv2460355
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:18,302
- Description:originalFile=Yoruban_inv.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 172 SVs from 38 studies. See in: genome view
Overlapping variant regions from other studies: 491 SVs from 72 studies. See in: genome view
Overlapping variant regions from other studies: 171 SVs from 23 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv2460355 | Remapped | Pass | GRCh38.p12 | Primary Assembly | Second Pass | NC_000001.11 | Chr1 | - | 149,343,658 | 149,361,959 | 149,361,959 |
| esv2460355 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000001.10 | Chr1 | 145,095,333 | 145,096,401 | 145,118,260 | 145,120,234 |
| esv2460355 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000001.9 | Chr1 | 143,806,690 | 143,807,758 | 143,829,617 | 143,831,591 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv5374595 | Remapped | Pass | NC_000001.11:g.(?_ 149343658)_(149361 959_149361959)inv | GRCh38.p12 | Second Pass | NC_000001.11 | Chr1 | - | 149,343,658 | 149,361,959 | 149,361,959 |
| essv5374595 | Remapped | Perfect | NC_000001.10:g.(14 5095333_145096401) _(145118260_145120 234)inv | GRCh37.p13 | First Pass | NC_000001.10 | Chr1 | 145,095,333 | 145,096,401 | 145,118,260 | 145,120,234 |
| essv5374595 | Submitted genomic | NC_000001.9:g.(143 806690_143807758)_ (143829617_1438315 91)inv | NCBI36 (hg18) | NC_000001.9 | Chr1 | 143,806,690 | 143,807,758 | 143,829,617 | 143,831,591 |