esv2484274
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,312
- Description:originalFile=Yoruban_large_indels_8.4x.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 245 SVs from 52 studies. See in: genome view
Overlapping variant regions from other studies: 230 SVs from 46 studies. See in: genome view
Overlapping variant regions from other studies: 69 SVs from 25 studies. See in: genome view
Overlapping variant regions from other studies: 112 SVs from 16 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
esv2484274 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 5,159,325 | 5,160,636 |
esv2484274 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 5,201,523 | 5,202,599 |
esv2484274 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_003871071.1 | Chr10|NW_0 03871071.1 | 188,991 | 190,302 |
esv2484274 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 5,191,523 | 5,192,599 |
Variant Call Information
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
---|---|---|---|---|---|---|---|---|---|
essv5234210 | Remapped | Pass | NC_000010.11:g.(51 59325_?)_(?_516063 6)ins? | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 5,159,325 | 5,160,636 |
essv5234210 | Remapped | Pass | NW_003871071.1:g.( 188991_?)_(?_19030 2)ins? | GRCh37.p13 | Second Pass | NW_003871071.1 | Chr10|NW_0 03871071.1 | 188,991 | 190,302 |
essv5234210 | Remapped | Perfect | NC_000010.10:g.(52 01523_?)_(?_520259 9)ins? | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 5,201,523 | 5,202,599 |
essv5234210 | Submitted genomic | NC_000010.9:g.(519 1523_?)_(?_5192599 )ins? | NCBI36 (hg18) | NC_000010.9 | Chr10 | 5,191,523 | 5,192,599 |