esv2519726
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:insertion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:1,232
- Description:originalFile=Yoruban_large_indels_8.4x.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 148 SVs from 39 studies. See in: genome view
Overlapping variant regions from other studies: 135 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 25 SVs from 13 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2519726 | Remapped | Pass | GRCh38.p12 | Primary Assembly | First Pass | NC_000010.11 | Chr10 | 115,246,233 | 115,247,464 |
| esv2519726 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000010.10 | Chr10 | 117,006,020 | 117,006,932 |
| esv2519726 | Remapped | Pass | GRCh37.p13 | PATCHES | Second Pass | NW_004775432.1 | Chr10|NW_0 04775432.1 | 219,697 | 220,928 |
| esv2519726 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000010.9 | Chr10 | 116,996,010 | 116,996,922 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv5375641 | Remapped | Pass | NC_000010.11:g.(11 5246233_?)_(?_1152 47464)ins? | GRCh38.p12 | First Pass | NC_000010.11 | Chr10 | 115,246,233 | 115,247,464 |
| essv5375641 | Remapped | Pass | NW_004775432.1:g.( 219697_?)_(?_22092 8)ins? | GRCh37.p13 | Second Pass | NW_004775432.1 | Chr10|NW_0 04775432.1 | 219,697 | 220,928 |
| essv5375641 | Remapped | Perfect | NC_000010.10:g.(11 7006020_?)_(?_1170 06932)ins? | GRCh37.p13 | First Pass | NC_000010.10 | Chr10 | 117,006,020 | 117,006,932 |
| essv5375641 | Submitted genomic | NC_000010.9:g.(116 996010_?)_(?_11699 6922)ins? | NCBI36 (hg18) | NC_000010.9 | Chr10 | 116,996,010 | 116,996,922 |