esv2538891
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:39,163
- Description:originalFile=Yoruban_cnv.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 1277 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 1277 SVs from 80 studies. See in: genome view
Overlapping variant regions from other studies: 586 SVs from 26 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2538891 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 24,499,600 | 24,538,762 |
| esv2538891 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 24,744,747 | 24,783,909 |
| esv2538891 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 22,295,840 | 22,335,002 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv5249926 | Remapped | Perfect | NC_000015.10:g.(?_ 24499600)_(2453876 2_?)del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 24,499,600 | 24,538,762 |
| essv5249926 | Remapped | Perfect | NC_000015.9:g.(?_2 4744747)_(24783909 _?)del | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 24,744,747 | 24,783,909 |
| essv5249926 | Submitted genomic | NC_000015.8:g.(?_2 2295840)_(22335002 _?)del | NCBI36 (hg18) | NC_000015.8 | Chr15 | 22,295,840 | 22,335,002 |