esv2555036
- Organism: Homo sapiens
- Study:estd197 (McKernan et al. 2009)
- Variant Type:inversion
- Method Type:Sequencing
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:6,652
- Description:originalFile=Yoruban_inv.gff
- Publication(s):McKernan et al. 2009
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 467 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 464 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 208 SVs from 13 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv2555036 | Remapped | Good | GRCh38.p12 | Primary Assembly | First Pass | NC_000023.11 | ChrX | 49,156,773 | 49,156,773 | 49,163,424 | 49,163,424 |
| esv2555036 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000023.10 | ChrX | 49,013,110 | 49,013,574 | 49,019,325 | 49,019,762 |
| esv2555036 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000023.9 | ChrX | 48,900,054 | 48,900,518 | 48,906,269 | 48,906,706 |
Variant Call Information
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv5235645 | Remapped | Good | NC_000023.11:g.(49 156773_49156773)_( 49163424_49163424) inv | GRCh38.p12 | First Pass | NC_000023.11 | ChrX | 49,156,773 | 49,156,773 | 49,163,424 | 49,163,424 |
| essv5235645 | Remapped | Perfect | NC_000023.10:g.(49 013110_49013574)_( 49019325_49019762) inv | GRCh37.p13 | First Pass | NC_000023.10 | ChrX | 49,013,110 | 49,013,574 | 49,019,325 | 49,019,762 |
| essv5235645 | Submitted genomic | NC_000023.9:g.(489 00054_48900518)_(4 8906269_48906706)i nv | NCBI36 (hg18) | NC_000023.9 | ChrX | 48,900,054 | 48,900,518 | 48,906,269 | 48,906,706 |