esv2665812
- Organism: Homo sapiens
- Study:estd199 (1000 Genomes Consortium Phase 1)
- Variant Type:copy number variation
- Method Type:Sequencing
- Submitted on:GRCh37 (hg19)
- Variant Calls:65
- Validation:Yes
- Clinical Assertions: No
- Region Size:9,328
- Description:High quality site
- Publication(s):1000 Genomes Project Consortium et al. 2012
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 637 SVs from 60 studies. See in: genome view
Overlapping variant regions from other studies: 196 SVs from 43 studies. See in: genome view
Overlapping variant regions from other studies: 323 SVs from 41 studies. See in: genome view
Overlapping variant regions from other studies: 637 SVs from 60 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| esv2665812 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 31,620,295 | 31,629,621 |
| esv2665812 | Remapped | Good | GRCh38.p12 | ALT_REF_LOCI_2 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| esv2665812 | Remapped | Good | GRCh38.p12 | PATCHES | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| esv2665812 | Submitted genomic | GRCh37 (hg19) | Primary Assembly | NC_000015.9 | Chr15 | 31,912,498 | 31,921,824 |
Variant Call Information
| Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
|---|---|---|---|---|---|
| essv5450923 | deletion | SAMN00000476 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,421 |
| essv5466699 | deletion | SAMN00006383 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,723 |
| essv5483391 | deletion | SAMN00006571 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,708 |
| essv5489488 | deletion | SAMN00797154 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,341 |
| essv5496537 | deletion | SAMN00001131 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,611 |
| essv5547403 | deletion | SAMN00001176 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,261 |
| essv5560626 | deletion | SAMN00006378 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 972 |
| essv5569014 | deletion | SAMN00007797 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,159 |
| essv5592316 | deletion | SAMN00001035 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,325 |
| essv5604686 | deletion | SAMN00007823 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,287 |
| essv5625344 | deletion | SAMN00006462 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,778 |
| essv5649990 | deletion | SAMN00000454 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,020 |
| essv5743901 | deletion | SAMN00004668 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,117 |
| essv5776899 | deletion | SAMN00000535 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,183 |
| essv5787541 | deletion | SAMN00001189 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,771 |
| essv5829142 | deletion | SAMN00009108 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,494 |
| essv5847135 | deletion | SAMN00000494 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,068 |
| essv5856291 | deletion | SAMN00000570 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 924 |
| essv5876466 | deletion | SAMN00006570 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,706 |
| essv5904123 | deletion | SAMN00009204 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 847 |
| essv5927974 | deletion | SAMN00006441 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,777 |
| essv5979358 | deletion | SAMN00007714 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,155 |
| essv5987174 | deletion | SAMN00007830 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 794 |
| essv6016326 | deletion | SAMN00000419 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,634 |
| essv6034692 | deletion | SAMN00001635 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,158 |
| essv6036002 | deletion | SAMN00000545 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,005 |
| essv6050155 | deletion | SAMN00007785 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,287 |
| essv6059219 | deletion | SAMN00000423 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,491 |
| essv6090464 | deletion | SAMN00006514 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,671 |
| essv6092542 | deletion | SAMN00006384 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,564 |
| essv6108247 | deletion | SAMN00006438 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,799 |
| essv6143297 | deletion | SAMN00001265 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 933 |
| essv6166056 | deletion | SAMN00001639 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,246 |
| essv6186355 | deletion | SAMN00001172 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,516 |
| essv6192005 | deletion | SAMN00007812 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,364 |
| essv6200154 | deletion | SAMN00006565 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,730 |
| essv6208611 | deletion | SAMN00004696 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,778 |
| essv6208640 | deletion | SAMN00000439 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,142 |
| essv6208806 | deletion | SAMN00000533 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,138 |
| essv6215249 | deletion | SAMN00000434 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,579 |
| essv6229558 | deletion | SAMN00004622 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 762 |
| essv6230525 | deletion | SAMN00001162 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,432 |
| essv6237960 | deletion | SAMN00007792 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,081 |
| essv6272258 | deletion | SAMN00006555 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,653 |
| essv6275783 | deletion | SAMN00001586 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,356 |
| essv6284479 | deletion | SAMN00007855 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 891 |
| essv6289080 | deletion | SAMN00000925 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,217 |
| essv6297960 | deletion | SAMN00014326 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,595 |
| essv6300847 | deletion | SAMN00001126 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,684 |
| essv6321360 | deletion | SAMN00014375 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 656 |
| essv6327591 | deletion | SAMN00009159 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,606 |
| essv6384914 | deletion | SAMN00000506 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,170 |
| essv6388361 | deletion | SAMN00001152 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,509 |
| essv6402836 | deletion | SAMN00001127 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,924 |
| essv6410267 | deletion | SAMN00006558 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,756 |
| essv6411598 | deletion | SAMN00007870 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 837 |
| essv6412748 | deletion | SAMN00016981 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 897 |
| essv6444323 | deletion | SAMN00009240 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,579 |
| essv6444904 | deletion | SAMN00006519 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,739 |
| essv6446788 | deletion | SAMN00001148 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,511 |
| essv6479963 | deletion | SAMN00001667 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,455 |
| essv6530171 | deletion | SAMN00001130 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,544 |
| essv6543712 | deletion | SAMN00009100 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,675 |
| essv6557809 | deletion | SAMN00001146 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,412 |
| essv6563844 | deletion | SAMN00009157 | Sequencing | Paired-end mapping, Read depth, Read depth and paired-end mapping, Split read mapping | 1,373 |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Start | Stop |
|---|---|---|---|---|---|---|---|---|---|
| essv5450923 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5466699 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5483391 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5489488 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5496537 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5547403 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5560626 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5569014 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5592316 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5604686 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5625344 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5649990 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5743901 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5776899 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5787541 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5829142 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5847135 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5856291 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5876466 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5904123 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5927974 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5979358 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5987174 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6016326 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6034692 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6036002 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6050155 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6059219 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6090464 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6092542 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6108247 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6143297 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6166056 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6186355 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6192005 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6200154 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6208611 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6208640 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6208806 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6215249 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6229558 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6230525 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6237960 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6272258 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6275783 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6284479 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6289080 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6297960 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6300847 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6321360 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6327591 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6384914 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6388361 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6402836 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6410267 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6411598 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6412748 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6444323 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6444904 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6446788 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6479963 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6530171 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6543712 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6557809 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv6563844 | Remapped | Good | NT_187660.1:g.3905 446_3914773delA | GRCh38.p12 | Second Pass | NT_187660.1 | Chr15|NT_1 87660.1 | 3,905,446 | 3,914,773 |
| essv5450923 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5466699 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5483391 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5489488 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5496537 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5547403 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5560626 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5569014 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5592316 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5604686 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5625344 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5649990 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5743901 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5776899 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5787541 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5829142 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5847135 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5856291 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5876466 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5904123 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5927974 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5979358 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv5987174 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6016326 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6034692 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6036002 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6050155 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6059219 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6090464 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6092542 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6108247 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6143297 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6166056 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6186355 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
| essv6192005 | Remapped | Good | NW_011332701.1:g.3 792994_3802321delA | GRCh38.p12 | Second Pass | NW_011332701.1 | Chr15|NW_0 11332701.1 | 3,792,994 | 3,802,321 |
Validation Information
| Variant Call ID | Experiment ID | Sample ID | Method | Analysis | Result |
|---|---|---|---|---|---|
| essv6016326 | 9 | SAMN00000419 | Oligo aCGH | Probe signal intensity | Pass |
| essv6059219 | 9 | SAMN00000423 | Oligo aCGH | Probe signal intensity | Pass |
| essv6215249 | 9 | SAMN00000434 | Oligo aCGH | Probe signal intensity | Pass |
| essv6208640 | 9 | SAMN00000439 | Oligo aCGH | Probe signal intensity | Pass |
| essv5649990 | 9 | SAMN00000454 | Oligo aCGH | Probe signal intensity | Pass |
| essv5450923 | 9 | SAMN00000476 | Oligo aCGH | Probe signal intensity | Pass |
| essv5847135 | 9 | SAMN00000494 | Oligo aCGH | Probe signal intensity | Pass |
| essv6384914 | 9 | SAMN00000506 | Oligo aCGH | Probe signal intensity | Pass |
| essv6208806 | 9 | SAMN00000533 | Oligo aCGH | Probe signal intensity | Pass |
| essv5776899 | 9 | SAMN00000535 | Oligo aCGH | Probe signal intensity | Pass |
| essv6036002 | 9 | SAMN00000545 | Oligo aCGH | Probe signal intensity | Pass |
| essv5856291 | 9 | SAMN00000570 | Oligo aCGH | Probe signal intensity | Pass |
| essv6289080 | 9 | SAMN00000925 | Oligo aCGH | Probe signal intensity | Pass |
| essv5592316 | 9 | SAMN00001035 | Oligo aCGH | Probe signal intensity | Pass |
| essv6300847 | 9 | SAMN00001126 | Oligo aCGH | Probe signal intensity | Pass |
| essv6402836 | 9 | SAMN00001127 | Oligo aCGH | Probe signal intensity | Pass |
| essv6530171 | 9 | SAMN00001130 | Oligo aCGH | Probe signal intensity | Pass |
| essv5496537 | 9 | SAMN00001131 | Oligo aCGH | Probe signal intensity | Pass |
| essv6557809 | 9 | SAMN00001146 | Oligo aCGH | Probe signal intensity | Pass |
| essv6446788 | 9 | SAMN00001148 | Oligo aCGH | Probe signal intensity | Pass |
| essv6388361 | 9 | SAMN00001152 | Oligo aCGH | Probe signal intensity | Pass |
| essv6230525 | 9 | SAMN00001162 | Oligo aCGH | Probe signal intensity | Pass |
| essv6186355 | 9 | SAMN00001172 | Oligo aCGH | Probe signal intensity | Pass |
| essv5547403 | 9 | SAMN00001176 | Oligo aCGH | Probe signal intensity | Pass |
| essv5787541 | 9 | SAMN00001189 | Oligo aCGH | Probe signal intensity | Pass |
| essv6143297 | 9 | SAMN00001265 | Oligo aCGH | Probe signal intensity | Pass |
| essv6275783 | 9 | SAMN00001586 | Oligo aCGH | Probe signal intensity | Pass |
| essv6034692 | 9 | SAMN00001635 | Oligo aCGH | Probe signal intensity | Pass |
| essv6166056 | 9 | SAMN00001639 | Oligo aCGH | Probe signal intensity | Pass |
| essv6479963 | 9 | SAMN00001667 | Oligo aCGH | Probe signal intensity | Pass |
| essv6229558 | 9 | SAMN00004622 | Oligo aCGH | Probe signal intensity | Pass |
| essv5743901 | 9 | SAMN00004668 | Oligo aCGH | Probe signal intensity | Pass |
| essv6208611 | 9 | SAMN00004696 | Oligo aCGH | Probe signal intensity | Pass |
| essv5560626 | 9 | SAMN00006378 | Oligo aCGH | Probe signal intensity | Pass |
| essv5466699 | 9 | SAMN00006383 | Oligo aCGH | Probe signal intensity | Pass |
| essv6092542 | 9 | SAMN00006384 | Oligo aCGH | Probe signal intensity | Pass |
| essv6108247 | 9 | SAMN00006438 | Oligo aCGH | Probe signal intensity | Pass |
| essv5927974 | 9 | SAMN00006441 | Oligo aCGH | Probe signal intensity | Pass |
| essv5625344 | 9 | SAMN00006462 | Oligo aCGH | Probe signal intensity | Pass |
| essv6090464 | 9 | SAMN00006514 | Oligo aCGH | Probe signal intensity | Pass |
| essv6444904 | 9 | SAMN00006519 | Oligo aCGH | Probe signal intensity | Pass |
| essv6272258 | 9 | SAMN00006555 | Oligo aCGH | Probe signal intensity | Pass |
| essv6410267 | 9 | SAMN00006558 | Oligo aCGH | Probe signal intensity | Pass |
| essv6200154 | 9 | SAMN00006565 | Oligo aCGH | Probe signal intensity | Pass |
| essv5876466 | 9 | SAMN00006570 | Oligo aCGH | Probe signal intensity | Pass |
| essv5483391 | 9 | SAMN00006571 | Oligo aCGH | Probe signal intensity | Pass |
| essv5979358 | 9 | SAMN00007714 | Oligo aCGH | Probe signal intensity | Pass |
| essv6050155 | 9 | SAMN00007785 | Oligo aCGH | Probe signal intensity | Pass |
| essv6237960 | 9 | SAMN00007792 | Oligo aCGH | Probe signal intensity | Pass |
| essv5569014 | 9 | SAMN00007797 | Oligo aCGH | Probe signal intensity | Pass |
| essv6192005 | 9 | SAMN00007812 | Oligo aCGH | Probe signal intensity | Pass |
| essv5604686 | 9 | SAMN00007823 | Oligo aCGH | Probe signal intensity | Pass |
| essv5987174 | 9 | SAMN00007830 | Oligo aCGH | Probe signal intensity | Pass |
| essv6284479 | 9 | SAMN00007855 | Oligo aCGH | Probe signal intensity | Pass |
| essv6411598 | 9 | SAMN00007870 | Oligo aCGH | Probe signal intensity | Pass |
| essv6543712 | 9 | SAMN00009100 | Oligo aCGH | Probe signal intensity | Pass |
| essv5829142 | 9 | SAMN00009108 | Oligo aCGH | Probe signal intensity | Pass |
| essv6563844 | 9 | SAMN00009157 | Oligo aCGH | Probe signal intensity | Pass |
| essv6327591 | 9 | SAMN00009159 | Oligo aCGH | Probe signal intensity | Pass |
| essv5904123 | 9 | SAMN00009204 | Oligo aCGH | Probe signal intensity | Pass |
| essv6444323 | 9 | SAMN00009240 | Oligo aCGH | Probe signal intensity | Pass |
| essv6297960 | 9 | SAMN00014326 | Oligo aCGH | Probe signal intensity | Pass |
| essv6321360 | 9 | SAMN00014375 | Oligo aCGH | Probe signal intensity | Pass |
| essv6412748 | 9 | SAMN00016981 | Oligo aCGH | Probe signal intensity | Pass |
| essv5489488 | 9 | SAMN00797154 | Oligo aCGH | Probe signal intensity | Pass |
| essv6016326 | 7 | SAMN00000419 | SNP array | Probe signal intensity | Pass |
| essv6059219 | 7 | SAMN00000423 | SNP array | Probe signal intensity | Pass |
| essv6215249 | 7 | SAMN00000434 | SNP array | Probe signal intensity | Pass |
| essv6208640 | 7 | SAMN00000439 | SNP array | Probe signal intensity | Pass |
| essv5649990 | 7 | SAMN00000454 | SNP array | Probe signal intensity | Pass |
| essv5450923 | 7 | SAMN00000476 | SNP array | Probe signal intensity | Pass |
| essv5847135 | 7 | SAMN00000494 | SNP array | Probe signal intensity | Pass |
| essv6384914 | 7 | SAMN00000506 | SNP array | Probe signal intensity | Pass |
| essv6208806 | 7 | SAMN00000533 | SNP array | Probe signal intensity | Pass |
| essv5776899 | 7 | SAMN00000535 | SNP array | Probe signal intensity | Pass |
| essv6036002 | 7 | SAMN00000545 | SNP array | Probe signal intensity | Pass |
| essv5856291 | 7 | SAMN00000570 | SNP array | Probe signal intensity | Pass |
| essv6289080 | 7 | SAMN00000925 | SNP array | Probe signal intensity | Pass |
| essv5592316 | 7 | SAMN00001035 | SNP array | Probe signal intensity | Pass |
| essv6300847 | 7 | SAMN00001126 | SNP array | Probe signal intensity | Pass |
| essv6402836 | 7 | SAMN00001127 | SNP array | Probe signal intensity | Pass |
| essv6530171 | 7 | SAMN00001130 | SNP array | Probe signal intensity | Pass |
| essv5496537 | 7 | SAMN00001131 | SNP array | Probe signal intensity | Pass |
| essv6557809 | 7 | SAMN00001146 | SNP array | Probe signal intensity | Pass |
| essv6446788 | 7 | SAMN00001148 | SNP array | Probe signal intensity | Pass |
| essv6388361 | 7 | SAMN00001152 | SNP array | Probe signal intensity | Pass |
| essv6230525 | 7 | SAMN00001162 | SNP array | Probe signal intensity | Pass |
| essv6186355 | 7 | SAMN00001172 | SNP array | Probe signal intensity | Pass |
| essv5547403 | 7 | SAMN00001176 | SNP array | Probe signal intensity | Pass |
| essv5787541 | 7 | SAMN00001189 | SNP array | Probe signal intensity | Pass |
| essv6143297 | 7 | SAMN00001265 | SNP array | Probe signal intensity | Pass |
| essv6275783 | 7 | SAMN00001586 | SNP array | Probe signal intensity | Pass |
| essv6034692 | 7 | SAMN00001635 | SNP array | Probe signal intensity | Pass |
| essv6166056 | 7 | SAMN00001639 | SNP array | Probe signal intensity | Pass |
| essv6479963 | 7 | SAMN00001667 | SNP array | Probe signal intensity | Pass |
| essv6229558 | 7 | SAMN00004622 | SNP array | Probe signal intensity | Pass |
| essv5743901 | 7 | SAMN00004668 | SNP array | Probe signal intensity | Pass |
| essv6208611 | 7 | SAMN00004696 | SNP array | Probe signal intensity | Pass |
| essv5560626 | 7 | SAMN00006378 | SNP array | Probe signal intensity | Pass |
| essv5466699 | 7 | SAMN00006383 | SNP array | Probe signal intensity | Pass |
| essv6092542 | 7 | SAMN00006384 | SNP array | Probe signal intensity | Pass |
| essv6108247 | 7 | SAMN00006438 | SNP array | Probe signal intensity | Pass |
| essv5927974 | 7 | SAMN00006441 | SNP array | Probe signal intensity | Pass |
| essv5625344 | 7 | SAMN00006462 | SNP array | Probe signal intensity | Pass |
| essv6090464 | 7 | SAMN00006514 | SNP array | Probe signal intensity | Pass |
| essv6444904 | 7 | SAMN00006519 | SNP array | Probe signal intensity | Pass |
| essv6272258 | 7 | SAMN00006555 | SNP array | Probe signal intensity | Pass |
| essv6410267 | 7 | SAMN00006558 | SNP array | Probe signal intensity | Pass |
| essv6200154 | 7 | SAMN00006565 | SNP array | Probe signal intensity | Pass |
| essv5876466 | 7 | SAMN00006570 | SNP array | Probe signal intensity | Pass |
| essv5483391 | 7 | SAMN00006571 | SNP array | Probe signal intensity | Pass |
| essv5979358 | 7 | SAMN00007714 | SNP array | Probe signal intensity | Pass |
| essv6050155 | 7 | SAMN00007785 | SNP array | Probe signal intensity | Pass |
| essv6237960 | 7 | SAMN00007792 | SNP array | Probe signal intensity | Pass |
| essv5569014 | 7 | SAMN00007797 | SNP array | Probe signal intensity | Pass |
| essv6192005 | 7 | SAMN00007812 | SNP array | Probe signal intensity | Pass |
| essv5604686 | 7 | SAMN00007823 | SNP array | Probe signal intensity | Pass |
| essv5987174 | 7 | SAMN00007830 | SNP array | Probe signal intensity | Pass |
| essv6284479 | 7 | SAMN00007855 | SNP array | Probe signal intensity | Pass |
| essv6411598 | 7 | SAMN00007870 | SNP array | Probe signal intensity | Pass |
| essv6543712 | 7 | SAMN00009100 | SNP array | Probe signal intensity | Pass |
| essv5829142 | 7 | SAMN00009108 | SNP array | Probe signal intensity | Pass |
| essv6563844 | 7 | SAMN00009157 | SNP array | Probe signal intensity | Pass |
| essv6327591 | 7 | SAMN00009159 | SNP array | Probe signal intensity | Pass |
| essv5904123 | 7 | SAMN00009204 | SNP array | Probe signal intensity | Pass |
| essv6444323 | 7 | SAMN00009240 | SNP array | Probe signal intensity | Pass |
| essv6297960 | 7 | SAMN00014326 | SNP array | Probe signal intensity | Pass |
| essv6321360 | 7 | SAMN00014375 | SNP array | Probe signal intensity | Pass |
| essv6412748 | 7 | SAMN00016981 | SNP array | Probe signal intensity | Pass |
| essv5489488 | 7 | SAMN00797154 | SNP array | Probe signal intensity | Pass |