esv274961
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:11,015
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 166 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 166 SVs from 42 studies. See in: genome view
Overlapping variant regions from other studies: 48 SVs from 16 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv274961 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000012.12 | Chr12 | 73,645,716 | 73,649,879 | 73,652,743 | 73,656,730 |
| esv274961 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000012.11 | Chr12 | 74,039,496 | 74,043,659 | 74,046,523 | 74,050,510 |
| esv274961 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000012.10 | Chr12 | 72,325,763 | 72,329,926 | 72,332,790 | 72,336,777 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv2586145 | copy number loss | SNP array | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv2586145 | Remapped | Perfect | NC_000012.12:g.(73 645716_73649879)_( 73652743_73656730) del | GRCh38.p12 | First Pass | NC_000012.12 | Chr12 | 73,645,716 | 73,649,879 | 73,652,743 | 73,656,730 |
| essv2586145 | Remapped | Perfect | NC_000012.11:g.(74 039496_74043659)_( 74046523_74050510) del | GRCh37.p13 | First Pass | NC_000012.11 | Chr12 | 74,039,496 | 74,043,659 | 74,046,523 | 74,050,510 |
| essv2586145 | Submitted genomic | NC_000012.10:g.(72 325763_72329926)_( 72332790_72336777) del | NCBI36 (hg18) | NC_000012.10 | Chr12 | 72,325,763 | 72,329,926 | 72,332,790 | 72,336,777 |