esv274981
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:15,689
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 138 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 138 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 45 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv274981 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000015.10 | Chr15 | 35,495,493 | 35,495,623 | 35,508,179 | 35,511,181 |
| esv274981 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000015.9 | Chr15 | 35,787,694 | 35,787,824 | 35,800,380 | 35,803,382 |
| esv274981 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000015.8 | Chr15 | 33,574,986 | 33,575,116 | 33,587,672 | 33,590,674 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv2585801 | copy number loss | SNP array | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv2585801 | Remapped | Perfect | NC_000015.10:g.(35 495493_35495623)_( 35508179_35511181) del | GRCh38.p12 | First Pass | NC_000015.10 | Chr15 | 35,495,493 | 35,495,623 | 35,508,179 | 35,511,181 |
| essv2585801 | Remapped | Perfect | NC_000015.9:g.(357 87694_35787824)_(3 5800380_35803382)d el | GRCh37.p13 | First Pass | NC_000015.9 | Chr15 | 35,787,694 | 35,787,824 | 35,800,380 | 35,803,382 |
| essv2585801 | Submitted genomic | NC_000015.8:g.(335 74986_33575116)_(3 3587672_33590674)d el | NCBI36 (hg18) | NC_000015.8 | Chr15 | 33,574,986 | 33,575,116 | 33,587,672 | 33,590,674 |