esv275068
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:14,667
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 141 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 141 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 58 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv275068 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000007.14 | Chr7 | 21,926,489 | 21,933,577 | 21,939,887 | 21,941,155 |
| esv275068 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000007.13 | Chr7 | 21,966,107 | 21,973,195 | 21,979,505 | 21,980,773 |
| esv275068 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000007.12 | Chr7 | 21,932,632 | 21,939,720 | 21,946,030 | 21,947,298 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv2585372 | copy number loss | SNP array | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv2585372 | Remapped | Perfect | NC_000007.14:g.(21 926489_21933577)_( 21939887_21941155) del | GRCh38.p12 | First Pass | NC_000007.14 | Chr7 | 21,926,489 | 21,933,577 | 21,939,887 | 21,941,155 |
| essv2585372 | Remapped | Perfect | NC_000007.13:g.(21 966107_21973195)_( 21979505_21980773) del | GRCh37.p13 | First Pass | NC_000007.13 | Chr7 | 21,966,107 | 21,973,195 | 21,979,505 | 21,980,773 |
| essv2585372 | Submitted genomic | NC_000007.12:g.(21 932632_21939720)_( 21946030_21947298) del | NCBI36 (hg18) | NC_000007.12 | Chr7 | 21,932,632 | 21,939,720 | 21,946,030 | 21,947,298 |