esv275121
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:14,803
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 219 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 219 SVs from 24 studies. See in: genome view
Overlapping variant regions from other studies: 97 SVs from 11 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv275121 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000008.11 | Chr8 | 32,571,946 | 32,574,851 | 32,584,838 | 32,586,748 |
| esv275121 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000008.10 | Chr8 | 32,429,464 | 32,432,369 | 32,442,356 | 32,444,266 |
| esv275121 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000008.9 | Chr8 | 32,549,006 | 32,551,911 | 32,561,898 | 32,563,808 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv2586073 | copy number loss | SNP array | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv2586073 | Remapped | Perfect | NC_000008.11:g.(32 571946_32574851)_( 32584838_32586748) del | GRCh38.p12 | First Pass | NC_000008.11 | Chr8 | 32,571,946 | 32,574,851 | 32,584,838 | 32,586,748 |
| essv2586073 | Remapped | Perfect | NC_000008.10:g.(32 429464_32432369)_( 32442356_32444266) del | GRCh37.p13 | First Pass | NC_000008.10 | Chr8 | 32,429,464 | 32,432,369 | 32,442,356 | 32,444,266 |
| essv2586073 | Submitted genomic | NC_000008.9:g.(325 49006_32551911)_(3 2561898_32563808)d el | NCBI36 (hg18) | NC_000008.9 | Chr8 | 32,549,006 | 32,551,911 | 32,561,898 | 32,563,808 |