esv275167
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:13,372
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 142 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 142 SVs from 31 studies. See in: genome view
Overlapping variant regions from other studies: 30 SVs from 12 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
esv275167 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000006.12 | Chr6 | 137,964,585 | 137,967,399 | 137,977,165 | 137,977,956 |
esv275167 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000006.11 | Chr6 | 138,285,722 | 138,288,536 | 138,298,302 | 138,299,093 |
esv275167 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000006.10 | Chr6 | 138,327,415 | 138,330,229 | 138,339,995 | 138,340,786 |
Variant Call Information
Variant Call ID | Type | Method | Analysis |
---|---|---|---|
essv2585931 | copy number loss | SNP array | Other |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
---|---|---|---|---|---|---|---|---|---|---|---|
essv2585931 | Remapped | Perfect | NC_000006.12:g.(13 7964585_137967399) _(137977165_137977 956)del | GRCh38.p12 | First Pass | NC_000006.12 | Chr6 | 137,964,585 | 137,967,399 | 137,977,165 | 137,977,956 |
essv2585931 | Remapped | Perfect | NC_000006.11:g.(13 8285722_138288536) _(138298302_138299 093)del | GRCh37.p13 | First Pass | NC_000006.11 | Chr6 | 138,285,722 | 138,288,536 | 138,298,302 | 138,299,093 |
essv2585931 | Submitted genomic | NC_000006.10:g.(13 8327415_138330229) _(138339995_138340 786)del | NCBI36 (hg18) | NC_000006.10 | Chr6 | 138,327,415 | 138,330,229 | 138,339,995 | 138,340,786 |