esv275277
- Organism: Homo sapiens
- Study:estd176 (Banerjee et al. 2011)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:16,028
- Publication(s):Banerjee et al. 2011
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 209 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 209 SVs from 48 studies. See in: genome view
Overlapping variant regions from other studies: 51 SVs from 15 studies. See in: genome view
Variant Region Placement Information
| Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| esv275277 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000005.10 | Chr5 | 85,618,436 | 85,622,517 | 85,627,907 | 85,634,463 |
| esv275277 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000005.9 | Chr5 | 84,914,254 | 84,918,335 | 84,923,725 | 84,930,281 |
| esv275277 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000005.8 | Chr5 | 84,950,010 | 84,954,091 | 84,959,481 | 84,966,037 |
Variant Call Information
| Variant Call ID | Type | Method | Analysis |
|---|---|---|---|
| essv2585856 | copy number loss | SNP array | Other |
Variant Call Placement Information
| Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Outer Start | Inner Start | Inner Stop | Outer Stop |
|---|---|---|---|---|---|---|---|---|---|---|---|
| essv2585856 | Remapped | Perfect | NC_000005.10:g.(85 618436_85622517)_( 85627907_85634463) del | GRCh38.p12 | First Pass | NC_000005.10 | Chr5 | 85,618,436 | 85,622,517 | 85,627,907 | 85,634,463 |
| essv2585856 | Remapped | Perfect | NC_000005.9:g.(849 14254_84918335)_(8 4923725_84930281)d el | GRCh37.p13 | First Pass | NC_000005.9 | Chr5 | 84,914,254 | 84,918,335 | 84,923,725 | 84,930,281 |
| essv2585856 | Submitted genomic | NC_000005.8:g.(849 50010_84954091)_(8 4959481_84966037)d el | NCBI36 (hg18) | NC_000005.8 | Chr5 | 84,950,010 | 84,954,091 | 84,959,481 | 84,966,037 |