esv2756709
- Organism: Homo sapiens
- Study:estd49 (Gusev et al. 2008)
- Variant Type:copy number variation
- Method Type:SNP array
- Submitted on:NCBI36 (hg18)
- Variant Calls:1
- Validation:Not tested
- Clinical Assertions: No
- Region Size:94,616
- Publication(s):Gusev et al. 2008
Source: NCBI
- Genome View
- Variant Region Details and Evidence
- Validation Information
- Clinical Assertions
- Genotype Information
Genome View
Select assembly:Overlapping variant regions from other studies: 342 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 342 SVs from 63 studies. See in: genome view
Overlapping variant regions from other studies: 89 SVs from 18 studies. See in: genome view
Variant Region Placement Information
Variant Region ID | Placement Type | Score | Assembly | Assembly Unit | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
esv2756709 | Remapped | Perfect | GRCh38.p12 | Primary Assembly | First Pass | NC_000011.10 | Chr11 | 49,282,806 | 49,377,421 |
esv2756709 | Remapped | Perfect | GRCh37.p13 | Primary Assembly | First Pass | NC_000011.9 | Chr11 | 49,304,358 | 49,398,973 |
esv2756709 | Submitted genomic | NCBI36 (hg18) | Primary Assembly | NC_000011.8 | Chr11 | 49,260,934 | 49,355,549 |
Variant Call Information
Variant Call ID | Type | Sample ID | Method | Analysis | Other Calls in this Sample and Study |
---|---|---|---|---|---|
essv101800 | copy number loss | NA19238 | SNP array | SNP genotyping analysis | essv101799, essv101797, essv101798 |
Variant Call Placement Information
Variant Call ID | Placement Type | Score | HGVS | Assembly | Reciprocity | Sequence ID | Chr | Inner Start | Inner Stop |
---|---|---|---|---|---|---|---|---|---|
essv101800 | Remapped | Perfect | NC_000011.10:g.(?_ 49282806)_(4937742 1_?)del | GRCh38.p12 | First Pass | NC_000011.10 | Chr11 | 49,282,806 | 49,377,421 |
essv101800 | Remapped | Perfect | NC_000011.9:g.(?_4 9304358)_(49398973 _?)del | GRCh37.p13 | First Pass | NC_000011.9 | Chr11 | 49,304,358 | 49,398,973 |
essv101800 | Submitted genomic | NC_000011.8:g.(?_4 9260934)_(49355549 _?)del | NCBI36 (hg18) | NC_000011.8 | Chr11 | 49,260,934 | 49,355,549 |