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dbVar

Database of genomic structural variation

esv2757878

Organism: Homo sapiens

Study:estd1 (Redon et al. 2006)
Variant Type:copy number variation
Method Type:BAC aCGH
Submitted on:NCBI35 (hg17)

Variant Calls:6
Validation:Not tested
Clinical Assertions: No
Region Size:157,482

Publication(s):Redon et al. 2006

Links to Other Resources

Overlapping Genes

Source: NCBI

Genome View
Variant Region Details and Evidence
Validation Information
Clinical Assertions
Genotype Information

Genome View

Select assembly:

Overlapping variant regions from other studies: 511 SVs from 57 studies. See in: genome view

Remapped(Score: Perfect):77,349,703-77,507,184

Variant Region Placement Information

Variant Region ID	Placement Type	Score	Assembly	Assembly Unit	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
esv2757878	Remapped	Perfect	GRCh38.p12	Primary Assembly	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
esv2757878	Remapped	Perfect	GRCh37.p13	Primary Assembly	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
esv2757878	Submitted genomic		NCBI35 (hg17)	Primary Assembly		NC_000003.9	Chr3	77,481,544	77,639,025

Variant Call Information

Variant Call ID	Type	Sample ID	Method	Analysis	Other Calls in this Sample and Study
essv14650	copy number gain	NA19093	BAC aCGH	Probe signal intensity	98
essv17038	copy number gain	NA19144	BAC aCGH	Probe signal intensity	157
essv17833	copy number gain	NA10831	BAC aCGH	Probe signal intensity	132
essv20307	copy number gain	NA12144	BAC aCGH	Probe signal intensity	116
essv20624	copy number gain	NA07056	BAC aCGH	Probe signal intensity	99
essv22740	copy number gain	NA07019	BAC aCGH	Probe signal intensity	69

Variant Call Placement Information

Variant Call ID	Placement Type	Score	HGVS	Assembly	Reciprocity	Sequence ID	Chr	Inner Start	Inner Stop
essv14650	Remapped	Perfect	NC_000003.12:g.(?_ 77349703)_(7750718 4_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
essv17038	Remapped	Perfect	NC_000003.12:g.(?_ 77349703)_(7750718 4_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
essv17833	Remapped	Perfect	NC_000003.12:g.(?_ 77349703)_(7750718 4_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
essv20307	Remapped	Perfect	NC_000003.12:g.(?_ 77349703)_(7750718 4_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
essv20624	Remapped	Perfect	NC_000003.12:g.(?_ 77349703)_(7750718 4_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
essv22740	Remapped	Perfect	NC_000003.12:g.(?_ 77349703)_(7750718 4_?)dup	GRCh38.p12	First Pass	NC_000003.12	Chr3	77,349,703	77,507,184
essv14650	Remapped	Perfect	NC_000003.11:g.(?_ 77398854)_(7755633 5_?)dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
essv17038	Remapped	Perfect	NC_000003.11:g.(?_ 77398854)_(7755633 5_?)dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
essv17833	Remapped	Perfect	NC_000003.11:g.(?_ 77398854)_(7755633 5_?)dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
essv20307	Remapped	Perfect	NC_000003.11:g.(?_ 77398854)_(7755633 5_?)dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
essv20624	Remapped	Perfect	NC_000003.11:g.(?_ 77398854)_(7755633 5_?)dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
essv22740	Remapped	Perfect	NC_000003.11:g.(?_ 77398854)_(7755633 5_?)dup	GRCh37.p13	First Pass	NC_000003.11	Chr3	77,398,854	77,556,335
essv14650	Submitted genomic		NC_000003.9:g.(?_7 7481544)_(77639025 _?)dup	NCBI35 (hg17)		NC_000003.9	Chr3	77,481,544	77,639,025
essv17038	Submitted genomic		NC_000003.9:g.(?_7 7481544)_(77639025 _?)dup	NCBI35 (hg17)		NC_000003.9	Chr3	77,481,544	77,639,025
essv17833	Submitted genomic		NC_000003.9:g.(?_7 7481544)_(77639025 _?)dup	NCBI35 (hg17)		NC_000003.9	Chr3	77,481,544	77,639,025
essv20307	Submitted genomic		NC_000003.9:g.(?_7 7481544)_(77639025 _?)dup	NCBI35 (hg17)		NC_000003.9	Chr3	77,481,544	77,639,025
essv20624	Submitted genomic		NC_000003.9:g.(?_7 7481544)_(77639025 _?)dup	NCBI35 (hg17)		NC_000003.9	Chr3	77,481,544	77,639,025
essv22740	Submitted genomic		NC_000003.9:g.(?_7 7481544)_(77639025 _?)dup	NCBI35 (hg17)		NC_000003.9	Chr3	77,481,544	77,639,025

No validation data were submitted for this variant

No clinical assertion data were submitted for this variant

No genotype data were submitted for this variant

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